Rhinolophus ferrumequinum (greater horseshoe bat): 117016739
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Entry
117016739 CDS
T07722
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04015
Rap1 signaling pathway
rfq04517
IgSF CAM signaling
rfq04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
117016739 (RAPGEF6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117016739 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117016739 (RAPGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117016739
NCBI-ProteinID:
XP_032952253
Ensembl:
ENSRFEG00010014306
LinkDB
All DBs
Position
24:complement(7972490..8152954)
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AA seq
1623 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSTRARYERYSG
NQILFCSETIARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDINSYLSLPADLTKMHITDNPH
PQVPHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMVFEV
VEQAGATILEDGQELDSWYVILNGTVEISHSDGKVENLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKGFGIFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEQTSQEKG
NKKVKANTVSGGRNKIRKILDKTRFSILPPKLFRRLFCDGGLSQSQDDSIVGTRHCRHSL
AIMPIPGTLSSSSPDLLQPTTSMLDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDT
TAKEVVCHAVHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLK
NNMETETLCSDEDAQELLKESQLSMLQLSTIELATQLSMRDFDLFRNIEPTEYIDDLFKL
ESKTGNTHLKEFEDIVNQETFWVASEILTESNQLKRMKIVKHFIKIALHCRECKNFNSMF
AIISGLNLASVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIP
LFPVVKKDMTFLHEGNDSKVDGLVNFEKLRMIAKEIRQVIRMTSANMDPAMMFRQRKKRW
RSLGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETD
EEKFQMMSLQLEPAYGTLTKTITEKRSAKLSEMSPVPMRSAGQTAKAHLHQPHRVSQVLQ
VPAVNLHPIRKKGQAKDPATLSTSLPQKVLGTSEEISGKKHAEDTISVASSLQSSPPASP
QGSPRKGYTLIPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDDRCSSQAVMVPE
PTGVLEKTEHSSGAGDQSQLGPGWTFSKPSLIKNLPVTSSVSNEEISHEHVIIEAADSGR
GSWTSCSSSSHDNFQSLPNPKGWDFLNSYRHTHLDGPIAEVEPPDCEPYSCPKGCSRTCG
PCKGSLETDPVRQSWASSSSLSDSYEPNYGTVKRRVLESGPAESSEGSDAKDGTDPVYKT
VTSSTEKGLIVYCVTSPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLKPPDYSVAVQR
SKLMPHGLSRPPPASLGNSPMACVPSKTVTQPQRHHLQPSHPKLADVTDADSEADENEQV
SAV
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacccgtggaccccggcgctaggcaagcgctaaagaagaagccgccggagcgg
actcccgaggacttaaatactatttattcgtatcttcatggaatggaaatactatcaaac
ctcagggaacatcagcttagattaatgtctacaagagcacgctatgagagatacagtggc
aatcagattctcttttgttcagaaactattgccagatgctggtatatcctgctttctgga
tctgtgcttatgaaagactccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcgacgg
aggtttcggaaaattaactataaaggagagcgccaaaccattactgatgatgtggatatt
aacagctatctttctcttccagcggatcttacaaagatgcacatcacagacaaccctcat
ccacaggtgcctcatgtatcttctagtcagtctggttgtagcatcgctagtgactctgga
agcagcagtttatctgatatctatcaggccacagaaagcgaggtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagatgaagagatt
gatcggacagatccactgcaggggcgagatcttgttcgagaatgtcttgaaaaagaacct
gcagacaaaactgatgatgacattgaacaattactggagtttatgcaccagctccctgct
tttgcaaacatgaccatgtctgtaaggagagaactctgctcagtgatggtttttgaagtg
gtagagcaggcaggagctactattcttgaagacggacaagagcttgactcatggtatgta
attttaaacggcactgtagaaatcagtcattcagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattactcccactctggataagcagtacatgcatggcgttgttagg
actaaagtagatgattgtcagtttgtttgcatagcccagcaggattactggagaatttta
aatcatgtggaaaaaaatacccataaagttgaggaagagggagaaattgttatggtacat
gagcaccgtgaactagatcggagcggaaccaggaaaggacacattgtaatcaaggcaaca
cctgagcgtctcatcatgcatttaatagaggagcattccattgtggacccaacctacata
gaagattttctgttaacttacaggacgtttcttgaaagtcctttggatgttggcatcaaa
ctattggaatggtttaaaattgacagcttaagggataaggtaacacggattgtattatta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctggag
gaatttgaaaaaaatctggaagatacaaaaatgaatggtcacctccggttgctgaatatt
gcgtgtgctgcaaaggcgaagtggagacaggtggtactgcagaaggcctcccgggagtcc
ccgctgcatttcagcctcaatggagggagtgagaagggatttggtatttttgtcgaagga
gtagaacctggtagcaaagctgctgatgccggactgaaacgtggtgatcagataatggaa
gtaaatggacaaaactttgagaatattacatttgtgaaggcccttgaaattctgaggaat
aatactcatcttgcacttactgtaaagaccaacatttttgtattcaaagagttacttagt
aggaccgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccattcaatccaggatgtaccaggagatattgaacagacgtcacaggaaaaagga
aataagaaagtaaaagccaatactgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgatttagtattttgcctccaaaactatttaggagactgttttgtgatgga
ggcctgagccaatcacaagatgacagcattgtgggaacaagacactgtagacatagtttg
gccatcatgccgattcctgggacactgtcatccagcagcccggatctcctgcagcctacc
accagcatgttggatttttctaatccttcagctgttggtttttactatattcctgatcaa
gttataagagttttcaaagctgatcaacaaagttgctacattatcatcagtaaagacact
acagctaaagaagttgtttgtcatgctgttcatgaatttggtttgactggcgcatccgac
acatattctctctgtgaagtttctgttactcctgagggtgtcataaaacagagaagactt
ccggaccaattctcaaaattagctgatagaattcaacttaatggaaggtattatttaaaa
aataacatggaaacagaaaccttatgttcagatgaagatgctcaagaactgcttaaggaa
agccagctctccatgctgcagctcagcaccattgagctggccacccagctgtccatgcgg
gactttgatctgtttcgtaatatcgagcctactgaatacattgatgacctttttaagtta
gagtccaaaacaggaaatactcacttgaaagagtttgaggacattgtaaaccaagagaca
ttctgggttgcctcagagattttaacggaatcaaatcagcttaaacgaatgaagattgtt
aagcattttattaaaattgcacttcattgtcgagaatgtaagaacttcaattccatgttt
gcaataatcagtggcttgaacctggcatctgtagcccgactcagaggtacttgggaaaag
ttaccaagcaagtatgagaaacacctgcaagatctacaagacctttttgatccatctaga
aacatggcaaagtatagaaatattcttagtagtcaaagcatgcagcctccaattatcccc
ctcttccccgttgtcaagaaagatatgacatttctacatgaaggaaatgactccaaagta
gatggtttagtaaattttgagaagctaagaatgattgccaaggaaatccgtcaagttatt
cgaatgacttctgctaacatggacccagctatgatgttccgacagaggaagaagaggtgg
cggagtctggggtcattgagtcaaggcagcaccaactcaaacatgctggatgttcagggc
ggtgctcacaaaaaaagggcacgacgcagctctctgcttaatgctaagaagctgtatgag
gatgcccagatggcaaggaaggtgaagcagtatctctccagtctggacgtcgagacagat
gaggagaagttccagatgatgtcattgcagttggagcctgcgtatgggaccttgaccaag
actataactgagaaaagatcagccaaattatcagaaatgtctccagtgcctatgaggtca
gctggccaaacagctaaagcccatttgcatcagcctcacagagtaagccaggtgcttcaa
gtgccagctgttaatttgcaccccatcaggaagaagggacaagcaaaagaccctgccaca
ttgagtacaagtttacctcagaaagttttaggaacgagtgaagaaataagtggtaagaaa
catgcagaagacactatttctgtggcatcatccttacagtctagtcctcctgcatctcct
caaggttcccctcgcaaaggttacacacttataccatcagctaaatctgacaacttatct
gactccagccacagtgagatttcttcacggtccagcattgtgagcaattgttctgtggac
tccatgtctgcagctctgcaggacgaccggtgttcctcccaggctgtcatggtccctgaa
cccaccggggtactggaaaagacagagcactcctcaggggcaggagaccagagtcagctt
ggcccgggatggactttctcaaagccatctctaatcaagaatttacctgtcacatcatct
gtgagcaatgaggagatttctcatgagcacgtcattatagaagcagctgatagtggtcgt
ggaagttggacttcctgttcaagcagctcccatgacaacttccaaagccttccaaaccca
aaaggctgggattttttgaactcgtaccgacatacccatttggacggccccattgccgaa
gtcgagccccctgactgtgagccctactcctgccctaagggctgctctagaacttgtggt
ccgtgcaaaggcagcctggagactgatccagtgagacagagttgggcctcctccagttct
ctatctgactcgtacgaaccaaactacgggacagttaagcggagagtgttggagagcggc
ccagccgagtcatccgaaggttcggacgccaaggatgggactgacccagtttacaaaact
gttacttccagtacagagaagggcttgattgtgtactgtgtcacctcacccaagaaggag
gataggtatagggaacctccgcccactcctccaggatacatggggatttctttagcagac
ctaaaggaaggaccccacctccacctaaagcctccagattacagtgtggcagtgcagagg
tcaaagctcatgcctcatggcctctctagaccgccgccagcttctctcgggaacagcccc
atggcctgtgttccatcgaagactgtaactcagcctcagaggcaccatttgcagccgtcc
catcccaaactagcagacgtgacagacgcagatagcgaagcagatgaaaatgagcaggtt
tcagcagtctag
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