Rhinolophus ferrumequinum (greater horseshoe bat): 117032081
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Entry
117032081 CDS
T07722
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04140
Autophagy - animal
rfq05014
Amyotrophic lateral sclerosis
rfq05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117032081 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117032081 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
117032081 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rfq04131
]
117032081 (C9orf72)
Membrane trafficking [BR:
rfq04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117032081 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
117032081
NCBI-ProteinID:
XP_032979139
Ensembl:
ENSRFEG00010019054
UniProt:
A0A671FSX4
LinkDB
All DBs
Position
12:13739634..13761384
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AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTDQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRLCVDRLTHIIRKGRIWMHKERQEHVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTILNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPPERKCSRLCEPESTFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELSAFWRATSEEDMAQDTIIYTDESF
TPDLNVFQDVLHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKLFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgtccaccaccatcgccagctgttgccaagacagagattgctttaagc
ggtgaatcccctttattagcagccacttttgcctactgggacaacattcttggtcctcga
gtaagacacatttgggctccaaagacagaccaggtacttctcagcgatggagaaataact
tttcttgccaaccacaccctaaatggagaaattcttcgaaatgcagagagtggggcgata
gatgtgaagttctttgtgttgtctgaaaagggagtaattattgtttcattaatcttcgac
ggaaactggaatggggataggagcacatacggactatcaattatacttccgcagacagaa
cttagcttctacctcccacttcacagactgtgtgttgatagattaacacacattatccgg
aaaggaaggatatggatgcataaggaaaggcaagaacatgtccagaagatagtcttagaa
ggcacagagagaatggaagatcagggtcagagtattattccaatgcttactggagaagta
attcctgtaatggaactgctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacaattctcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctcaatgccattagctcacacttgcaaacctgtggctgttctgtcgtggtagggagcagt
gcagagaaagtaaataagattgtgagaacattatgcctttttctgactccgccagagaga
aaatgctccaggttatgtgaaccagaatcaacatttaaatacgagtcagggctctttgtc
caaggcctgctaaaggattcaactggaagctttgtgctacccttccggcaagttatgtat
gccccctatcccaccacacacatagatgtggacgtcaataccgtcaagcaaatgccaccc
tgccacgaacatatttataatcagcgtagatacatgaggtcagagctgtcagcattctgg
agagccacttcagaagaagacatggctcaggatactatcatctacacagacgaaagcttc
actcctgacttgaatgtttttcaagatgtcttacacagagacacgctagtaaaagccttc
ctagatcagatctttcatttgaaacccggtttatctctcaggagtactttccttgcacaa
tttctactcgtccttcacagaaaagccttgacgctaataaaatatatagaagatgatacg
cagaaagggaaaaagctctttaaatctcttcggaacctgaagatagatcttgatttaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaaaccaggcctacac
tcctttatctttggaagacctttctacactagtgtacaggaacgagatgtcctaatgact
ttttaa
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