Rhinolophus ferrumequinum (greater horseshoe bat): 117032444
Help
Entry
117032444 CDS
T07722
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04064
NF-kappa B signaling pathway
rfq04622
RIG-I-like receptor signaling pathway
rfq04623
Cytosolic DNA-sensing pathway
rfq05160
Hepatitis C
rfq05161
Hepatitis B
rfq05162
Measles
rfq05164
Influenza A
rfq05168
Herpes simplex virus 1 infection
rfq05169
Epstein-Barr virus infection
rfq05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
117032444 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117032444 (DDX58)
04623 Cytosolic DNA-sensing pathway
117032444 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
117032444 (DDX58)
05160 Hepatitis C
117032444 (DDX58)
05171 Coronavirus disease - COVID-19
117032444 (DDX58)
05164 Influenza A
117032444 (DDX58)
05162 Measles
117032444 (DDX58)
05168 Herpes simplex virus 1 infection
117032444 (DDX58)
05169 Epstein-Barr virus infection
117032444 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rfq04054
]
117032444 (DDX58)
Enzymes [BR:
rfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117032444 (DDX58)
Pattern recognition receptors [BR:
rfq04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
117032444 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
CCDC85
AAA_25
Motif
Other DBs
NCBI-GeneID:
117032444
NCBI-ProteinID:
XP_032979882
Ensembl:
ENSRFEG00010016504
LinkDB
All DBs
Position
12:complement(49838680..49876929)
Genome browser
AA seq
929 aa
AA seq
DB search
MTAEERRNLHAFQNYVTKILDPTYILSYMAPWFKEDELQYIQAEKNNKGVMEAASLFLKF
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFQKIEKLEEYRLLLRRLQPEFKTSIDP
DHILPDMCECLINQECEEIKQVCSNKGSMAGAEKMVECLLRSDKENWPKTLKLALEKEEN
KFSELWIVDTGSKDVETKDLEDEEMNTSDIQIVYKEEPECQNLSQNSCPPSEVSHTYSPT
KPRNYQLELALPAKQGRNTIICAPTGCGKTFVSLLICEHHLQKFPQGQKGKVVFFAIQLP
VYEQQKSVFSNYFERRGYKVSGISGATSEKVSVEQIVENNDIIILTPQILVNSLKNGTVP
SLSVFTLMIFDECHNTSKHHPYNMIMFNYLDQKLGGSSDPLPQIVGLTASVGVGDAKSTT
EAMEYICKLCASLDMSVIATVKDNLEELEEIVYKPQKFFRKVELRTDDRFKYIISQLMRE
TESLAKSVFGELGTVTLENLSEIQNRNFGTQKYEQWIVAVQKKCMVLQMADKDEESRICK
ALFLYTSHLRKLNDALIINEHARMKDALDYLKDFFTNVRSAGFDEIEQDLTRRFEEKLQE
LESISMDPSNENPKLKDLCFILQEEYHFNPDTRTILFVKTRALVDALKKWIEENSKLSFL
KPGILTGRGKTNQNIGMTLPAQKCVLDAFRTTDDNKILIATSVADEGIDIAQCNLVILYE
YVGNVIKMIQTRGRGRARGSKCFLLTSNADVIEKEKINMYKEKMMNDSILKIQTWDEEVF
KEKIRQIQIHEKFIRDSQGKAKPVLDKKNKKLLCRKCKAFACYTADIRVVEECHFTVVGD
AFRECFVSKLHPRPKSFGCFEKKAKIFCAREKCHHDWGIYVKYKAFEIPVIKIESFVVED
IATGQQRLYAKWRDFHFEKLPFDAAEMSQ
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaggagcggcggaatctgcacgctttccaaaactatgtcacgaagattctg
gaccctacctacatcctgagctacatggccccctggtttaaggaggatgagctgcagtat
attcaggctgagaaaaacaacaagggcgtgatggaggctgcctcactttttctcaagttc
ctgttggagctccaggaggaaggctggttccgtggctttttggacgctcttgaccatgca
ggttattctggcctttatgaagccattgaaagttgggatttccaaaaaattgaaaagttg
gaggagtatagattgcttttaaggcgtttgcaaccagaatttaaaaccagtattgatcca
gatcatatccttcctgatatgtgtgaatgtttaattaatcaagaatgtgaagaaattaaa
caggtttgttccaacaaggggtcaatggctggtgcagagaaaatggttgaatgccttctc
agatcagacaaggagaactggcccaaaactttgaaacttgctttggagaaagaagagaac
aagttcagtgaactgtggattgtagatacaggttccaaagatgttgaaacgaaagatctt
gaagatgaggaaatgaatacttctgacatacagattgtctacaaggaagaaccagaatgc
cagaatcttagtcagaattcatgtccaccttcagaagtgtctcatacttacagtccaaca
aagccaaggaattaccaactagagctcgctttgcctgctaagcaaggaagaaatacaata
atatgtgctcctactggttgtgggaaaacctttgtttcactgcttatatgtgaacatcat
cttcaaaaatttccacaaggacaaaaggggaaggttgtgttttttgctattcaacttcca
gtgtatgaacagcagaaatctgtgttctcaaactattttgagagacgtgggtacaaagtt
tcaggcatttctggagccacgtctgagaaggtctcagtggagcagattgttgagaacaat
gacatcatcatcttaactccacagattcttgtgaacagccttaaaaatgggactgttcca
tcactctctgtctttactttgatgatatttgatgaatgccacaacaccagtaaacaccat
ccttacaatatgatcatgtttaattatctagatcagaaactcggaggatcttcagaccca
ctgcctcagatcgttgggctgactgcctcggtcggtgttggggatgccaaaagcacaact
gaagccatggaatatatctgcaaactgtgtgcgtctcttgacatgtcagtgatagcaaca
gtcaaagacaacttagaggaactggaagaaattgtttataagccccagaagtttttcagg
aaagtggaattacggactgacgacagatttaaatatattatctctcagttaatgagggag
acagagagtctggcaaagagtgtctttggcgaactgggtaccgtaactctcgaaaactta
tctgaaattcaaaacaggaattttggaacacagaaatacgaacaatggattgttgcagtt
cagaaaaagtgcatggtgttacagatggcagacaaagatgaagagagcaggatttgtaaa
gcactgtttttgtacacttcacatttgcggaaattgaatgatgccctcattatcaatgag
catgcgcggatgaaagatgcgctggattacttgaaagacttcttcactaatgtccgatca
gcaggatttgatgagatagagcaagatcttactcggagatttgaagaaaagttgcaagaa
ctagaaagcatttccatggatcccagcaatgagaaccctaaactcaaagacctctgcttc
atcttgcaagaggagtaccattttaatccggacactagaaccattctctttgtgaaaacc
agagcacttgtggatgctttaaagaaatggattgaagaaaattctaaactcagctttcta
aaacctggcatattgactggacgtggcaaaacaaatcagaacataggaatgaccctccca
gcacagaagtgcgtattggatgcattcagaaccactgacgataacaagattctgatcgcc
acctcagttgctgatgaaggcatcgacattgctcagtgcaatctggtcatcctgtatgag
tatgtgggcaatgtcatcaaaatgatccaaaccagaggcagaggaagagcaagaggtagc
aagtgcttccttctgactagtaatgctgatgtaattgaaaaagaaaaaataaacatgtac
aaagaaaaaatgatgaatgactccattttaaagattcagacatgggatgaagaagtattt
aaagagaagattcgccagatacagatccatgaaaaattcatcagggatagtcaaggaaaa
gcaaaacctgtacttgataagaaaaataaaaaactgctctgcaggaagtgcaaagctttt
gcatgttatacagctgatataagagtggtggaggagtgccatttcactgtagttggagat
gctttcagagagtgctttgtgagtaaattacaccccagaccaaagagttttgggtgtttt
gagaagaaagcaaagatattctgtgccagagaaaagtgtcaccatgactgggggatctat
gtgaagtataaggcatttgagattccagttataaaaattgaaagttttgtggtggaggac
attgcaactggacaacagagactatatgcaaagtggagggactttcattttgagaagcta
ccatttgatgctgcagaaatgtcccaatga
DBGET
integrated database retrieval system
