Rhinolophus ferrumequinum (greater horseshoe bat): 117037787
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Entry
117037787 CDS
T07722
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03272
Virion - Hepatitis viruses
rfq04144
Endocytosis
rfq04913
Ovarian steroidogenesis
rfq04925
Aldosterone synthesis and secretion
rfq04927
Cortisol synthesis and secretion
rfq04934
Cushing syndrome
rfq04976
Bile secretion
rfq04979
Cholesterol metabolism
rfq05145
Toxoplasmosis
rfq05160
Hepatitis C
rfq05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117037787 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117037787 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
117037787 (LDLR)
04925 Aldosterone synthesis and secretion
117037787 (LDLR)
04927 Cortisol synthesis and secretion
117037787 (LDLR)
09154 Digestive system
04976 Bile secretion
117037787 (LDLR)
04979 Cholesterol metabolism
117037787 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
117037787 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
117037787 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
117037787 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
117037787 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rfq04131
]
117037787 (LDLR)
Membrane trafficking [BR:
rfq04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117037787 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
EGF
Vgb_lyase
EGF_3
Motif
Other DBs
NCBI-GeneID:
117037787
NCBI-ProteinID:
XP_032990137
Ensembl:
ENSRFEG00010012831
LinkDB
All DBs
Position
18:complement(39323120..39351929)
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AA seq
883 aa
AA seq
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MLQMTGAPHAVAAGLREARVSSGDTEDRGQRITAWAGALLEGAGSMRLCWSVALLLAAAG
AAVEDKCERNEFQCQDGTCISYKWVCDGSAECQDSSDESQETCRSATCKLEDFSCGGRVN
RCIPQFWRCDGQVDCENGSDEQGCPPKTCSSDEFRCHDGKCIAPGFVCDSDWDCLDGSDE
ASCPTPTCGPSSFQCNSSSCIPELWVCDGDDDCDDGSDEWPLHCGARNISATHGENPCSA
LEFHCRSGECIHSSWRCDGGPDCKDKSDEENCAKITCRPDEFQCSDGTCIHGSQQCDKEY
DCKDKSDELGCINVTLCQGPDKFKCHSGECITMDKVCNSVRDCRDWSDEPLQECGTNECL
DDKGGCSHICNDLKIGYECLCPKGFRLVGQQRCEDIDECQDPDACSQLCVNLEGSFKCEC
EKGFQLDPLTKACKASDTIAYLFFTNRHEVRKMTLDRREYTSLIPNLKNVVALDMEVASN
RVYWSDLSQRKIYSTQIDKAPSFSYDTVIGEDLQAPDGLAVDWIHSNIYWTDSILGTISV
ADTKGVKRKTLFKEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDI
QWPNGITLDLSSGRLYWVDSKLHSISSIDVNGQNRKTVLEDKKMLAHPFSLAIFEDKVFW
TDIINEAIFSANRLTGSDINLMAENLLSPEDIVLFHNLTQPRGVNWCDRPTLPNGGCQYL
CLPAPQINPHSPKFTCACPDGMLLAEDKRNCLTDPESVVTTQRPAAGHMTAVGPKRTAVP
KLTTTETGTTPLQALDDPASGRDEKTPRSVGALYIVLPIVLLTVLCFGTFLLWKNWRLKS
INSIHFDNPVYQKTTEDEVHICHSQDGYTYPSRQMVSLDDDVA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaatgactggggccccgcatgcagtcgccgctgggctgcgcgaagcccgggtt
tccagcggggacactgaggaccgcggacagcggataacggcctgggccggggcgttgctg
gagggggctgggagcatgaggctgtgctggtccgtcgccctgctcctcgccgcggcgggg
gctgcagtggaagacaaatgtgaaagaaatgagttccagtgccaagatgggacatgcatc
tcctacaagtgggtttgcgatgggagtgctgagtgccaggacagttctgatgagtcccag
gagacgtgcaggtctgcaacctgcaagttggaggacttcagctgcggtggccgtgtcaac
cgttgcattcctcagttctggaggtgtgatggtcaggtggactgtgagaatggctcagac
gagcaaggctgtccccccaagacgtgctcctcggacgagttccgctgccacgacgggaag
tgcatcgcaccggggttcgtctgcgactcggattgggactgcttggatggctccgacgag
gcatcctgccccacacccacctgcggcccctccagcttccagtgcaatagctccagctgc
atccctgagctatgggtctgtgacggcgacgacgactgcgatgatggctcagacgagtgg
ccgctgcactgtggtgcccgcaacatatccgccacacatggggaaaacccctgctcggcc
ctggagttccactgccgcagcggggaatgcatccactccagctggcgctgcgatggcggc
cccgactgcaaggacaagtctgacgaggagaactgcgctaagatcacgtgccggcctgac
gagttccagtgctcggatgggacctgcatccacggcagccagcagtgcgacaaggagtat
gactgcaaggacaaaagtgatgagcttggctgcatcaatgtgactttgtgccagggcccc
gacaagttcaagtgccacagcggtgaatgcatcaccatggacaaagtgtgcaactcggtc
cgggactgccgggactggtcggacgagcccctccaggagtgtgggaccaacgagtgcctg
gatgacaagggcggctgctcccatatctgcaacgacctcaagattggctacgagtgcttg
tgtcccaagggcttccggctggtgggccagcaaagatgcgaagatatcgacgagtgtcag
gaccctgacgcctgcagccagctctgcgtgaaccttgagggcagcttcaagtgcgagtgt
gagaagggcttccagttggaccccctcaccaaggcctgcaaggcttcggacaccatcgcc
tacctctttttcaccaaccgccacgaggtgagaaagatgacattggaccgcagagaatac
accagcctcatcccgaacttgaagaacgtggtggccctggacatggaggtggccagcaac
agagtctactggtccgacctgtcccaaaggaagatctacagcacccagattgacaaagca
cccagcttctcctatgataccgtcatcggcgaggacctccaggcccccgacgggctggca
gtggactggatccacagcaacatatactggaccgactccatcctgggcaccatctccgtg
gccgacaccaagggcgtgaagagaaagacactcttcaaagagaaagggtccaagcccagg
gccattgtggtggatcccgtgcatggcttcatgtactggacggattgggggactcctgcc
aagatcaaaaaggggggcctaaatggcgtggacgtttactcattggtgacagaggacatc
cagtggcccaatggcatcaccctggatctttccagtggccgcctctactgggtcgactcc
aagctccactccatctccagcatcgatgtcaatgggcagaaccggaagacagttttggag
gacaagaaaatgctggcgcaccccttttccttggccatctttgaggataaagtattttgg
acagatatcatcaacgaagccattttcagtgccaaccgcctcacggggtctgacattaat
ttgatggcagaaaacctgttatcaccagaggacattgtcctttttcacaacctcacccag
ccaagaggggtgaactggtgcgacaggcccaccctccccaatggcggctgccagtacctg
tgtctccccgcgccgcagatcaatccccactcgcccaagttcacctgtgcctgccccgat
ggcatgctgctggctgaggacaagaggaactgcctcacagaccctgaatctgtagtgacc
acccagaggccggccgcaggccacatgacagctgtgggtccgaagcgcacggctgttcct
aagctcaccaccaccgagacaggtactacgcccctccaagccctggacgaccctgctagc
ggaagggatgagaagacacccaggagcgtgggcgcgctgtacattgtcctcccgattgtt
ctgcttaccgtcctgtgctttgggaccttcctgctctggaagaactggcggctgaagagc
ataaacagcatccacttcgacaatcccgtgtaccagaagaccacggaggacgaggtccac
atctgccacagccaggacggctacacctacccttcgagacagatggtcagcctggatgat
gacgtggcatga
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