KEGG   Rhodoferax ferrireducens: Rfer_2607
Entry
Rfer_2607         CDS       T00334                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rfr  Rhodoferax ferrireducens
Pathway
rfr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rfer_2607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfr03400]
    Rfer_2607
Enzymes [BR:rfr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rfer_2607
DNA repair and recombination proteins [BR:rfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rfer_2607
 Prokaryotic type
     Rfer_2607
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S HHH_5
Other DBs
NCBI-ProteinID: ABD70323
UniProt: Q21V80
LinkDB
Position
2871652..2872305
AA seq 217 aa
MTPAAIESFFATLKAANPHPQTELAYASVFELLVAVLLSAQATDVSVNKVTRRLFLVANT
PQKMLDLGLEGLEEHIKTIGLYHAKARHLMQTCRMLVDQYGGAVPRTLEALQTLPGVGRK
TANVILNVAFGEPTMAVDTHLFRVANRTGLAPGKTPYEVEMKLLKRIPAEYLVDAHHWLI
LHGRYVCQARKPLCWQCAVSAFCDFKPKTPPDKARAR
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacacctgccgccatcgaatccttttttgccaccctgaaggcggccaacccccatccg
cagaccgagctggcatacgccagcgtgtttgagctgctggtcgccgtgctgctgtcagcc
caggccacggatgtcagcgtcaacaaagtcacgcgccgcctttttctggtggccaacacg
ccgcagaagatgctggacctgggcctggaggggctggaagagcacatcaagaccattggc
ctgtaccacgccaaggcccgccacctgatgcaaacctgccggatgctggtggatcaatac
ggcggcgcggtgccgcgcacgcttgaggcgctgcagaccctgccgggtgtggggcgcaaa
accgccaacgtcatcctgaacgtcgcgtttggcgagcccaccatggccgtggacactcat
ctctttcgcgtcgccaatcgcaccggtctggcgccgggcaaaacgccgtatgaggtggag
atgaagctgctcaaacgcattccagccgagtacctggtcgacgcgcaccactggctgatt
ctgcatgggcgctatgtgtgccaggcgcgcaagccgctgtgttggcagtgcgccgtgagc
gccttttgcgacttcaagccaaagacgcctcctgacaaggcgcgagcgcgctga

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