Rhodoferax ferrireducens: Rfer_3414
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Entry
Rfer_3414 CDS
T00334
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00540
Lipopolysaccharide biosynthesis
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Rfer_3414
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rfr01005
]
Rfer_3414
Enzymes [BR:
rfr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Rfer_3414
Lipopolysaccharide biosynthesis proteins [BR:
rfr01005
]
Lipid A
Rfer_3414
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Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ABD71123
UniProt:
Q21SY0
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All DBs
Position
3798640..3799563
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AA seq
307 aa
AA seq
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MLQQRTLKSLTHAVGVGLHSGQRVEITLRPAPPDTGIVFRRVDLPQVVEIAVSATAVSDT
TMASTIASGNVKVHTVEHLMSACAGLSVDNLYVDITAEEVPILDGSAASFVFLLQSAGIV
MQNAPRRFVRLTQTVEVREGSGATEKWARLAPYHGYQLSFEIDFDHPAVDATGQRVVFDM
SSGSYAKDIARARTFGFTKDVEMMRAKGLALGGGLDNAIVMDDYKILNAEGLRYDDEFVK
HKILDAMGDLYLLGKPLLANYSARRSGHALNNLLLRELLRRTDAWEVVTFEDAERAPRGF
AQLAPAW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcaacaacgaaccctcaaatccctgactcacgccgttggcgtgggcctgcacagc
ggccagcgcgtcgaaatcaccctgcggcccgcgccgcccgataccggcatcgtgttccgc
cgggtggatctgccgcaagtggtggagattgccgtctcggccaccgctgtctctgacact
accatggcgtccaccattgccagtggcaacgtcaaggtgcacacggtcgagcatttgatg
tcggcctgcgccggcttgagcgttgacaacctgtatgttgacatcacggccgaagaagtg
ccgatcctggacggctcggccgcctcctttgtgtttctgctgcaaagcgctggcatcgtg
atgcaaaacgcaccacggcgttttgtccggctgacccagacggtggaggtgcgcgagggc
agcggcgcgactgaaaaatgggcccgcctggcgccctaccatggctaccagctcagtttt
gagattgactttgaccacccggcggtggacgccaccggccagcgcgtggtgtttgacatg
agcagcggctcgtatgccaaggacatcgcccgtgcccgcacgtttggttttaccaaagac
gtggaaatgatgcgcgccaagggtctggcgctgggcggcggcctggacaatgccatcgtg
atggacgactacaagatcctcaacgccgagggcttgcgctacgacgacgagttcgtcaag
cacaaaatcctggatgccatgggcgacctctatctgctgggcaagcccttgctggcgaac
tacagcgcgcggcgttccggccacgccctcaacaacctgctgctgcgcgagttgctcagg
cgcaccgatgcctgggaagtggtcacttttgaagatgccgagcgcgcgcctcgcggcttt
gcgcaactggcaccggcctggtaa
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