Rhodoferax ferrireducens: Rfer_4105
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Entry
Rfer_4105 CDS
T00334
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr01501
beta-Lactam resistance
rfr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rfer_4105
01503 Cationic antimicrobial peptide (CAMP) resistance
Rfer_4105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfr03036
]
Rfer_4105
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_4105
01504 Antimicrobial resistance genes [BR:
rfr01504
]
Rfer_4105
Chromosome and associated proteins [BR:
rfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Rfer_4105
Transporters [BR:
rfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Rfer_4105
Antimicrobial resistance genes [BR:
rfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Rfer_4105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
DUF748
Motif
Other DBs
NCBI-ProteinID:
ABD71803
UniProt:
Q21R00
LinkDB
All DBs
Position
complement(4581957..4583108)
Genome browser
AA seq
383 aa
AA seq
DB search
MKNYFKPRWIALAVALASLLGVASFALTERASDAKKPATADKPALTVNATQPQSTTLPRK
ISANGNLAAWQEASIGTEANGLRLAEVRVNVGDVVKRGQVLATFAPDTIQADLAQMRAGM
AEAEATLAEAAANAQRARELQTTGALSAQQISQYLTAERTAQARVDAQRAMATTQQLRLA
QTQVLAPDSGVISARSATVGAVLPAGQELFRMIRQGRIEWRAEIPAVDLASLRSGMVATI
TPAGGVPIKGTVRMVAPTVDAATRNGIVYVDLPAPGAAKVGMFARGEFTLGSAEALTLPQ
TAVLLRDGFSYVLRIGPDSKVAQTKVSIGRRAGDRVEITGGLDPKARVVAGGGGFLSDGD
TVRVVETATPVKTASNASGVSAK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactacttcaaacctcgatggatcgcacttgcggtcgcgctggccagcctgctt
ggcgtggcctcgtttgccctcaccgagcgagcgtccgacgccaaaaagcccgcgaccgcg
gacaagcccgcactgacggtcaacgccacccagccgcaaagcacaacgctgccgcggaaa
atcagcgccaacggcaacctggccgcctggcaggaagccagcatcggcaccgaggccaac
ggcctgcggctggccgaggtgcgggtcaacgtgggcgacgtggtgaaacgcggccaggtg
ttggccacgttcgctcccgacacgattcaggccgacctggcccagatgcgcgcaggcatg
gccgaagccgaggccacgctggccgaggcggccgccaacgcccagcgcgcacgcgaactg
caaaccaccggcgccttgagtgcgcagcagatcagccagtacctcaccgccgagcgcacc
gcgcaggcccgggtcgatgcccagcgcgccatggccacaacgcagcagctgcgcctggcc
caaacccaggtgctggcgcccgacagcggcgtgatttcggcgcgcagcgccaccgtgggc
gcggtgttgccggccgggcaggagctctttcgcatgattcgccagggccggatcgagtgg
cgcgctgagatcccggccgtcgacttggcatcgctcaggtccggcatggtcgccacgatc
acgccggccggcggtgttcccatcaagggcaccgtgcgcatggtcgcaccgacggtcgat
gcggccacccgcaacgggatcgtctatgtcgacctgccggcgcccggcgcggccaaggtc
ggcatgttcgcgcgtggcgagttcacgctcggcagcgccgaggcgctcacgctgccgcag
acggcggtgctgctgcgcgacggcttcagctacgtgctgcgcatcggccccgattcgaag
gtcgcgcagaccaaggtgtcgatcggacgccgcgccggcgaccgcgtcgagatcaccggc
ggtctcgatccgaaagcacgcgtcgttgccggcggcggcggtttcctgtccgacggcgac
acggtgcgggtggtcgagacggccacgccggtgaagaccgcgtcgaacgccagcggcgtg
tcagccaagtga
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