Roseobacter fucihabitans: ROLI_003020
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Entry
ROLI_003020 CDS
T10342
Symbol
mcl1_2
Name
(GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00630
Glyoxylate and dicarboxylate metabolism
rfu00660
C5-Branched dibasic acid metabolism
rfu00680
Methane metabolism
rfu00720
Other carbon fixation pathways
rfu01100
Metabolic pathways
rfu01120
Microbial metabolism in diverse environments
rfu01200
Carbon metabolism
Module
rfu_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROLI_003020 (mcl1_2)
00660 C5-Branched dibasic acid metabolism
ROLI_003020 (mcl1_2)
09102 Energy metabolism
00720 Other carbon fixation pathways
ROLI_003020 (mcl1_2)
00680 Methane metabolism
ROLI_003020 (mcl1_2)
Enzymes [BR:
rfu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
ROLI_003020 (mcl1_2)
4.1.3.25 (S)-citramalyl-CoA lyase
ROLI_003020 (mcl1_2)
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
WVX47235
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All DBs
Position
complement(305735..306691)
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AA seq
318 aa
AA seq
DB search
MSFKIQPAAPARPNRCQLFGPGSRPAIFEKMAASDADVINLDLEDSVAPSDKDSARANVI
AAISDVDWGNKTFSVRINGLDTPFWYRDVVDLLEQAGERLDQIMIPKVGCAGDIYAVDAL
VTAVEAAKGRAKRISFEVIIESAAGIAHVEEIAAASPRLQAMSLGAADFAASMGMQTTGI
GGTQENYYMHRDGQKHWSDPWHWAQAAIVAACRTHGVLPVDGPFGDFSDDEGFRAQARRS
ATLGMVGKWAIHPKQVAIANEVFTPSAEAVAEAREILAAMEAAKAKGEGATVYKGRLVDI
ASIKQAEVIVRQSEMISG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaagatccagcccgccgcccctgcccgccccaaccgctgccagctctttggc
cccggttcgcgcccggcaatatttgagaaaatggcggcatcggacgcggatgtgatcaac
ctcgaccttgaagacagcgttgcgccctcggacaaggacagcgcccgcgccaatgtgatc
gcggcgatttcggacgtcgattgggggaacaaaaccttctccgtgcgaatcaacgggttg
gatacgcctttttggtatcgcgacgtcgtggaccttctggagcaggcgggcgaacgcctc
gatcaaatcatgatccccaaggttggctgtgccggtgacatctatgctgtcgatgcgctg
gtcactgccgtggaggccgccaaggggcgcgccaagaggatcagctttgaggtcatcatc
gaatccgccgccggtattgcccatgtcgaggaaatcgcggccgcctcgccgcgcctgcaa
gccatgagcctgggtgctgcggatttcgcggcctccatggggatgcagacgaccggcatc
ggcgggacgcaggagaactactacatgcaccgcgacgggcaaaagcactggtccgatccc
tggcattgggcgcaggcggccatcgttgcggcctgccgcacgcacggcgttttgcccgtg
gatggcccgtttggggatttctccgacgacgaggggttccgtgcgcaggcgcgccgttct
gccacgctgggtatggttggcaaatgggcgatccaccccaaacaggtggccatcgccaat
gaggtcttcaccccctccgctgaagccgtcgcagaggcccgcgaaatcctcgccgccatg
gaagcggccaaggccaagggcgaaggcgcgaccgtctataagggccgccttgtcgacatc
gcctcgatcaaacaggccgaagtcatcgtgcgccaatccgaaatgatcagcgggtga
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