Roseobacter fucihabitans: ROLI_007900
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Entry
ROLI_007900 CDS
T10342
Symbol
mdh_1
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00020
Citrate cycle (TCA cycle)
rfu00270
Cysteine and methionine metabolism
rfu00620
Pyruvate metabolism
rfu00630
Glyoxylate and dicarboxylate metabolism
rfu00680
Methane metabolism
rfu00710
Carbon fixation by Calvin cycle
rfu00720
Other carbon fixation pathways
rfu01100
Metabolic pathways
rfu01110
Biosynthesis of secondary metabolites
rfu01120
Microbial metabolism in diverse environments
rfu01200
Carbon metabolism
Module
rfu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rfu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rfu_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ROLI_007900 (mdh_1)
00620 Pyruvate metabolism
ROLI_007900 (mdh_1)
00630 Glyoxylate and dicarboxylate metabolism
ROLI_007900 (mdh_1)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
ROLI_007900 (mdh_1)
00720 Other carbon fixation pathways
ROLI_007900 (mdh_1)
00680 Methane metabolism
ROLI_007900 (mdh_1)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
ROLI_007900 (mdh_1)
Enzymes [BR:
rfu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
ROLI_007900 (mdh_1)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
3HCDH_N
Glyco_hydro_4
DUF357
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
WVX47719
LinkDB
All DBs
Position
complement(766437..767399)
Genome browser
AA seq
320 aa
AA seq
DB search
MARPKIALIGAGQIGGTLAHLAALKELGDVVLFDIAEGTPEGKALDIAESGPSAKFDATM
SGTQSYTDIAGADVCIVTAGVARKPGMSRDDLLGINLKVMKSVGEGIAAHAPDAFVICIT
NPLDAMVWALREFSGLPHEKVCGMAGVLDSARFRHFLASEFNVSMKDVTAFVLGGHGDTM
VPLVRYSTVAGIPLPDLVKMGWTTQDKLDAIVQRTRDGGAEIVGLLKTGSAFYAPATSAI
EMAESYLKDQKRVLPCAAFVDGAYGLNGFYVGVPTVIGAGGIERVVEISMNKDEQAMFDS
SVDAVKGLVKACKEIDASLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggccagacccaaaatcgcgctgatcggcgcaggtcagatcggcggcacgctcgcacat
ctggcagcgctaaaggaactcggcgatgtcgtcctgttcgacattgccgaaggcacgccg
gagggcaaggctctcgatatcgcggaaagcggcccctctgccaaattcgatgcgaccatg
tcaggcacgcaatcttataccgatatcgctggcgcggacgtctgcatcgtcactgccggt
gtcgcccgcaagccgggcatgagccgggatgaccttctgggcatcaatctcaaggttatg
aaatccgtgggcgagggcatcgccgctcatgcgccggatgctttcgtcatctgcatcacc
aacccgctggatgcgatggtctgggcgttgcgtgaattttctggtctgccacatgaaaag
gtctgcgggatggccggcgttctggactccgcgcgcttccgtcatttcctggccagcgaa
ttcaacgtctcgatgaaagacgtcaccgccttcgtgctgggcggtcatggcgatacgatg
gtgccgctggtgcgttactccacggtcgcgggcattccgcttcccgatctggtaaaaatg
ggctggaccacgcaggacaaactcgacgccatcgtgcaacgcacacgggatggcggtgcg
gaaatcgtcgggctgctgaaaaccggttccgcgttttatgcaccggcgacatcggcgatt
gaaatggccgaaagctatctcaaagatcaaaaacgcgtcctgccttgtgcggcatttgtt
gatggtgcctacggtctgaacggtttttatgtcggggtgccgaccgtgattggtgcaggt
ggcattgagcgtgtcgtggagatttcgatgaacaaggacgaacaggcgatgttcgacagc
tcagttgacgcggtcaaaggcctggtgaaagcctgtaaggaaatcgacgcaagcctcgca
taa
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