Pseudorhizobium flavum: RFYW14_00716
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Entry
RFYW14_00716 CDS
T07144
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RFYW14_00716
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfv01007
]
RFYW14_00716
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfv03016
]
RFYW14_00716
Enzymes [BR:
rfv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
RFYW14_00716
Amino acid related enzymes [BR:
rfv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RFYW14_00716
Transfer RNA biogenesis [BR:
rfv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RFYW14_00716
Prokaryotic type
Other AARSs
RFYW14_00716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
CAD6599899
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All DBs
Position
1:724669..727662
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AA seq
997 aa
AA seq
DB search
MTDTADKIDYSKTLYLPETEFPMRAGLPQKEPELVKRWQQMDLYRQLRASAAGREKFVLH
DGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSNYVPGWDCHGLPIEWKIEEKYREKG
KNKDEVPVNEFRQECREFAAHWIKVQSEEFKRLGIEGDFDNPYTTMNFHAEARIAGELLK
IAKSGQLYRGSKPVMWSVVERTALAEAEVEYADVESDTIWVKFPVVRMSEPGAALETGEA
YRQAVIAQNADGGVLGDLQGSFVVIWTTTPWTIPGNRAISYSPKVSYGLYEVTAAENDFG
PRPGEKLVFADKLAEESFAKAKLQYRKLRDVTAEELASLVCGHPLRQFGGGYEFPVPLLA
GDHVTDDAGTGFVHTAPSHGREDFDAWTDNVRELEARGIDTKIPFPVDDAGFYTADAPGF
GPDREGGPARVMDDNGKKGDANKAVIEALIAANNLFARGRLKHSYPHSWRSKKPVIFRNT
PQWFVYMDKDFGDGTTLRSRALKAIDETRFVPSAGQNRLRAMIEQRPDWVLSRQRAWGVP
ICVFVDEKGAILQDDTVNGRIMEAFEQEGADAWFAEGARERFLGSRANEGWTQVRDILDV
WFDSGSTHTFTLEDRPDLKWPADVYLEGSDQHRGWFHSSLLESAATRGRAPYDAVITHGF
TMDEKGQKMSKSLGNVVAPQDVMKDAGADILRLWVMTTDYWEDQRLGKTIIQTNVDAYRK
LRNTIRWMLGTLAHDEGEEIAYADLPELERLMLHRLAELDRLVRDGYDAFDFKKIARALI
DFANIELSAFYFDIRKDALYCDAPSSLRRRSALAAIRKIFDCMVTWLSPMLPFTTEEAWL
SRNPQAVSVHLEQFPEVPAEWRNEALAEKWSKVRRVRSVVTGALEIERKEKRIGSSLEAA
PVVHVSDTALMNALEGQDFEEICITSAIRVVAGEGPEAAFRLAEVPGVAVETKLAEGTKC
ARSWRVTKDVGSDPDYPEVSARDAAALRELAALGRLG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgcagacaagatcgattattccaagaccctctacctgcccgagaccgag
ttcccgatgcgcgccggcctgccgcagaaggaaccggaactggtcaagcgctggcagcag
atggatctttacagacaacttcgcgcctccgccgccggtcgcgaaaagttcgtgctgcat
gacggcccgccctatgccaacggcaacatccatatcggccacgcgctgaacaagatcctg
aaggacgtcatcacccgctccttccagatgcgcggttatgattccaactatgttcccggc
tgggactgccacggcctgccgatcgagtggaagatcgaggagaagtaccgcgagaagggc
aagaacaaggacgaggttccggtcaacgagttccgccaggaatgccgcgaattcgcggcg
cattggatcaaggtgcagtcggaggagttcaagcggctcggcatcgagggcgacttcgat
aatccctacacgacgatgaacttccacgcagaggcgcggatcgcaggcgaacttcttaag
atcgccaagtcgggccagctctatcggggctcgaagccggtgatgtggtcggtcgtcgag
cgcactgccctggccgaggccgaggtggaatatgccgatgtcgagagcgacacgatctgg
gtgaagttcccggttgtgcggatgagcgagccgggcgcggcgcttgagaccggtgaggca
tacaggcaggcggtcatcgcacagaacgccgatggtggtgtcctcggcgatctccagggt
tccttcgtcgtcatctggacgaccacgccctggacgatccccggcaaccgggcgatcagc
tattccccaaaggtgtcttacgggctgtatgaagtaacggcagcagaaaatgacttcggg
ccgcggcccggggaaaagctcgtcttcgccgataagctggccgaggagtcctttgccaag
gcgaagctgcagtaccgaaagcttcgcgatgtcacggccgaagagctcgcgtccctcgtg
tgcgggcacccgcttcgccagttcggtggcggctatgagttccccgtcccgcttctcgcc
ggcgatcacgtcaccgatgacgccggcaccggcttcgttcataccgcgcccagccatggc
cgagaggactttgacgcctggaccgataatgtccgcgagctcgaagcgcgcggcatcgac
acgaagatcccgttcccggtagacgatgccggcttctacaccgccgatgcccccggcttc
ggtccggaccgcgagggtggtcccgcccgcgtcatggacgacaacggcaagaagggtgat
gccaacaaggccgtcatcgaggcgctgattgccgccaacaatctgtttgcccgcggtcgg
ctgaagcattcctacccgcattcctggcgctcgaagaagccggtcatcttccgcaacacg
ccgcagtggttcgtctacatggacaaggacttcggcgacggcacgacgctgcgctcgcgc
gcgctgaaggcgatcgacgagacgcgcttcgtgccgtccgctggccagaaccgcctgcgc
gccatgatcgaacagcgcccggactgggtgctgtcgcgccagcgcgcctggggcgtgccg
atctgcgtcttcgtcgacgagaagggcgcgatcctgcaggacgacacagtgaacggccgc
atcatggaggctttcgagcaggagggtgccgacgcctggtttgccgaaggggctcgcgag
cgcttcctgggctcccgcgccaacgaaggctggacacaggtccgcgacattctcgatgtc
tggttcgactcgggttcgacccatacctttacgctggaagaccggccggatctgaaatgg
ccggcggacgtctatctcgaaggctccgaccagcatcgcggctggttccactcttcgctc
ctggaatcggcggccacccgcggccgcgcgccctatgacgccgtcatcacccatggcttc
actatggatgagaagggtcagaagatgtcgaagtcgctcggcaatgtcgtggcgccccag
gacgtcatgaaggatgccggcgccgacatccttcgcctctgggtcatgaccaccgattac
tgggaagaccagcgcctcggcaagacgatcatccagacgaatgtcgatgcctatcgcaag
ctgcgcaacacgatccgctggatgctcggcacgctcgcccacgacgaaggtgaagagatt
gcctatgcggatctgcccgaactagaacgtctaatgctgcatcgcctggcggaactggat
cggctggtgcgcgacggctatgacgccttcgacttcaagaagatcgctcgtgcgctgatc
gactttgccaatatcgagctgtcggccttctacttcgacatccgcaaggacgcgctctac
tgcgatgcgccgtcctcgctgcgccgtcgttcggcgctcgccgccatccgcaagatcttc
gactgcatggtgacctggctctcccccatgctgccgttcaccacggaagaagcctggctg
tcccgcaatccgcaagcggtctcggtgcatctggagcagttccccgaggtgccggcagaa
tggcgcaacgaagcgctcgcggaaaaatggtcgaaggtccgccgcgtgcgttcggtcgtc
acgggcgcactggagatcgagcgcaaggaaaagcggatcggctcgtcgctggaggcggca
ccggtcgtgcacgtgtcggataccgccctgatgaacgcgctcgaggggcaggatttcgaa
gagatctgtatcacttcggccatccgtgtggtcgccggcgaagggccggaagcagcgttc
cgtcttgccgaggtgccgggtgtcgcagtcgagacgaagctggcggaagggacgaagtgc
gcccgttcctggcgcgtcacgaaggatgtcgggtctgatcccgactaccctgaagtgtcg
gcacgagatgccgcagccttgcgtgaactggcggcccttggccgccttggctga
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