Pseudorhizobium flavum: RFYW14_04252
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Entry
RFYW14_04252 CDS
T07144
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv01501
beta-Lactam resistance
rfv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RFYW14_04252
01503 Cationic antimicrobial peptide (CAMP) resistance
RFYW14_04252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfv02000
]
RFYW14_04252
01504 Antimicrobial resistance genes [BR:
rfv01504
]
RFYW14_04252
Transporters [BR:
rfv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RFYW14_04252
Antimicrobial resistance genes [BR:
rfv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RFYW14_04252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
CAD6630373
LinkDB
All DBs
Position
p3:38056..41202
Genome browser
AA seq
1048 aa
AA seq
DB search
MAQFFIGRPIFAWVVAIFIMIAGILAIPMLPVAQYPNVAPPQISINANYAGASPEDIYQS
VTSPIEQELNSVDGLIYFESTSNSTGLLQITATFEPGTDSAKASIDVQNAVRRVEARLPQ
VVRQQGVQVQEAGSSFLMMVALISTDGQLDAVALGDYLNRNVLGEIQRIDGVGRAQVFAS
QRAMRVWIDPDKMLGLNLSSAEISQAIASQNAQVAAGRIGARPNPINQQIAATVLVRGQL
TSPEEFGAIVLRANPDGSSVRLRDVARVEIGAESYNFSTKINGLPAAAIGVQLSPSGNAM
ETATAVRERMAELAEFFPASLEYQIPYDTSPFVAVSIEKVIHTLIEAMILVFIVMFLFLQ
NIRYTIIPTLVVPVALLGTCAVMYASGFSINVLTMFAMVLAIGILVDDAIVVVENVERIM
AEEGLPPKEATRKAMGQISGAIIGITVVLTAVFIPMAFFPGAVGIIYQQFSLTMVVSILF
SGMLALSLTPALCATFLKPIKGHHEKKGFFGWFNRRFDAGTRRYAGAVGWTIRRAGRFMV
IYLLLVGGLAYLFLSLPSSFLPNEDQGFLIVDMQAPAEASANRTESVTDEVDALFASEPA
VADRTLISGFSFSGFGDNAGLAFITLKDWSERGADNSAQSIAQRINGQLFKIKDAVAFAL
SPPPIQGLGNAGGFSFRLQDRSGAGQTALGMATEQLLSIAGQSPVLTGIRVEGMPNAAQL
IVDIDREKANTFGVSFESINSTISANLGSAYINDFPNAGRMQRVTIQAEQSQRMTPDDIL
ELNVPNAAGGMVPVRSFATVQWTKGPAQVVGYNGYPAVRISGNAAPGFSSGAAIAEMEQL
MAQLPEGFGYEWSGQSLQEIQSGSQAPFLMGLTVVFIFLLLSALYESWSIPLSVMLVVPL
GIIGSVLAVMLRDMPNDVYFKVGLITIIGLSAKNAILIVEFAKDLRAEGKPLLEATIEAC
QLRFRPILMTSLAFTLGVVPLAIATGASAASQNAIGTGVLGGMISATILAVFFVPVFFVF
IMRLFDKKAKEVPVPNPIDRPEQAGSGD
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattttttattggtaggccgatcttcgcgtgggtcgtagcaattttcatcatg
atcgcggggatacttgcaatcccaatgcttccagtggcgcaatatccaaacgtcgcgccg
ccgcagatctccatcaatgcgaactatgcaggtgcctcacccgaagacatctaccaaagc
gtcacttcgccgatcgagcaggagctgaatagtgtcgatgggctgatctactttgaatcg
acgtctaactccacaggcttgctgcagatcacggctactttcgagcctggaacagattcc
gccaaggcgtctattgatgtccaaaatgcggttcggcgggtcgaggcacgtctgccgcag
gtcgttcgccagcaaggcgttcaggtccaggaggcgggcagcagcttcttgatgatggtc
gcgctgatttcgacggacgggcagctcgatgccgtagcgctcggagactatctcaaccgt
aacgtgctgggcgaaatccagcgcatcgatggcgtgggccgcgcccaggtcttcgccagc
cagcgcgccatgcgcgtatggatcgatcccgacaagatgcttggcctcaatctctcctcg
gccgaaatcagccaggcgatcgcgtcacaaaacgcgcaggttgcggcgggtcgaataggg
gctcgaccgaaccctatcaaccagcagatcgcagccacagttcttgtgaggggccagctg
acctcaccggaggagttcggagctattgtgttgcgcgcaaatccggacggttcttcagtg
cgtctccgggatgtggcacgggtcgagatcggggcggaaagctacaacttctccaccaag
atcaacggcttgccggcagcagcaattggggtacagctctcgccttcggggaatgccatg
gagacggcaaccgcggtgcgggagcgaatggcagaattggctgagttcttcccggcgagt
cttgaataccaaatcccttacgacacatcgcccttcgttgcagtctcgatcgagaaggtg
atccacacgttgatcgaggcgatgatcctcgtcttcatcgtgatgttcctgttcctgcag
aacattcgctacaccatcatcccgacgcttgtcgtcccggttgcgctgctcggcacttgc
gccgtgatgtacgcaagcggcttttccatcaacgtgctcaccatgtttgccatggtgctt
gctatcggtatcctcgtcgacgatgcgatcgtcgtggtggagaacgtcgagcggatcatg
gccgaagaaggcttgcctccgaaggaggcgacgcgaaaggcgatgggccagatctccggt
gccatcatcggcatcaccgtcgtccttactgccgtttttattcccatggctttctttcca
ggcgcggtcggcatcatctaccagcagttcagcctgacaatggttgtctcgatcctcttc
tccggcatgctggctctgtcgctgacgccggcgctttgcgcgaccttcctcaagcccatc
aaggggcaccacgagaagaagggcttctttggttggttcaatcgccgttttgatgcaggc
acccgcagatatgctggcgccgtcggctggaccatccggcgcgctggcagatttatggtc
atctatctgctcctcgtagggggcctcgcctatctcttcttaagcctgccctcttcgttc
cttcccaacgaagaccaggggttcctgatcgtcgatatgcaggctccggcagaggcaagt
gccaaccggacagaatccgtgaccgatgaagtagatgcacttttcgcgtcagaaccggca
gtcgccgataggactctcatcagcggctttagcttctcaggcttcggcgataatgccggc
ctcgcattcattacgctcaaagactggagcgaacgcggcgcagacaactcggcgcaatcg
attgcgcagcgtatcaacggacagctgttcaagatcaaagacgctgtcgcatttgccttg
tcgccgccaccgatccagggtctcggcaatgccggtggctttagttttaggcttcaggat
cgttcgggtgccggtcaaactgcgctcggaatggcaaccgagcagctcctatcgattgct
gggcagagtcctgttctgacgggaatacgtgtagagggcatgcccaatgcagcccagctc
atcgtcgatatcgatcgcgagaaagcaaacacctttggggtcagcttcgaaagcatcaat
tcgacaatctcggctaaccttggatcggcgtatatcaacgactttccaaacgcgggtcgg
atgcaacgcgtgacgattcaggccgaacagagccagcggatgacaccggatgatattctg
gaactcaacgttcccaatgcagccggcggtatggtgccggtgcgttcctttgctaccgta
caatggacgaagggaccggctcaggtggtaggctataatggctaccctgcagttcgcatt
agtggcaacgcagctcccggcttttcctccggcgcggctattgccgaaatggagcaactt
atggcgcagcttccggaagggtttggctatgagtggtcaggtcaatcacttcaggaaatc
cagtccggctcgcaggcgcccttcctgatgggtctgacggtcgtgttcattttcctgctg
ctttcggccctctacgaaagttggtcgatcccgctgtcagttatgctggttgtgccgttg
ggcattattggttcggtccttgcagtcatgctgcgtgacatgccaaatgacgtttacttc
aaagttggcctgatcacgatcatcgggctttcagcgaagaacgcaatcctgatagtggaa
ttcgccaaggatttgcgtgccgagggtaagccgctcctggaggcgacgatcgaggcctgc
cagcttcgcttccgtcccatcttgatgacgtctctggcgttcacgctaggggtcgtgccc
cttgccatcgcgacgggcgccagtgctgccagccagaacgcgattgggacaggcgtcctt
ggtggaatgatctccgccactattctggcggtgttcttcgtcccagtcttcttcgtcttc
attatgaggctattcgacaagaaggcaaaggaagtacctgtgccaaacccaatcgatcgg
ccagaacaagctgggagcggggattga
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