Rhizobium gallicum bv. gallicum: RGR602_CH03587
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Entry
RGR602_CH03587 CDS
T03539
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGR602_CH03587 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rga03400
]
RGR602_CH03587 (nth)
Enzymes [BR:
rga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RGR602_CH03587 (nth)
DNA repair and recombination proteins [BR:
rga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGR602_CH03587 (nth)
Prokaryotic type
RGR602_CH03587 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJD42894
UniProt:
A0A0B4X443
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All DBs
Position
3633826..3634605
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AA seq
259 aa
AA seq
DB search
MPDPKLKSVRKTSQKSKVITRRKAVPVRTAYSQAEREEIFRRFSIQRPEPRGELAHTNPF
TLVVAVALSAQATDAGVNKATRALFKVADTPEKMLALGEERLRDYIRTIGLYRNKAKNVM
ALSQMLVDEFGGEVPQKREELVRLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRIKL
APGKTPDEVEDRLMKVIPGHYLYHAHHWLILHGRYTCKARRPECERCVIADLCKSPEKSC
DIPAPLVELPPQVIGEAVE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatccgaaactcaaatccgtccgcaaaacatcgcaaaaatcgaaagtgatcacc
cgccgcaaggccgtcccggtgcgcaccgcgtattcgcaagccgagcgcgaggagatattc
cgccgcttctcgatccagcggccggaacccagaggcgagctggcacacaccaatccgttc
acgctcgtcgttgccgtggcactctccgcccaggcgacggatgccggtgtcaacaaggcg
acgcgggcgcttttcaaggtagcagatacgccggagaagatgttggcgctcggcgaggaa
cgccttcgcgactacatcaggacgatcggcctttaccgcaacaaggcgaagaacgtcatg
gcgctctcgcaaatgctggtcgatgaattcggcggcgaggttccgcagaagcgcgaggaa
ctcgtgcgcctgccgggcgtcggccgcaagacagcgaacgtggttctgtcgatggccttc
ggccaggcgacgatggcggtggacacgcacatcttccgcatcgccaatcgcatcaagctg
gcgccgggaaagacaccggacgaggtcgaggaccgcctgatgaaggtgatccccggtcac
tacctttatcatgcccaccactggctgatcctgcacggccgctacacgtgcaaggcgcgc
cgcccggaatgcgagcgctgcgtgatcgccgatctctgcaaatcgccggaaaagagctgc
gacataccggcgccgctggtcgaactgccgccgcaggtgatcggcgaggccgtcgaatag
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