Rubrivivax gelatinosus: RGE_15350
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Entry
RGE_15350 CDS
T01803
Symbol
nth
Name
(GenBank) endonuclease III Nth
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGE_15350 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_15350 (nth)
Enzymes [BR:
rge01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RGE_15350 (nth)
DNA repair and recombination proteins [BR:
rge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGE_15350 (nth)
Prokaryotic type
RGE_15350 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAL94876
UniProt:
I0HPD9
LinkDB
All DBs
Position
complement(1575528..1576172)
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AA seq
214 aa
AA seq
DB search
MHDDAIEPFFATLAAANPSPQTELEFTSVFELLCAVLLSAQATDAGVNKATKRLFALAPT
PQRMLDLGLEQVTELIRTIGLFRTKAKNLVQTCRILVEQHGGAVPRSREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVANRTGLAPGKNPLAVELKLLERVPAKYAVDAHHWLI
LHGRYVCQARRPQCERCAVRRWCDTAASTMPAEG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgacgcgatcgaacccttcttcgcgacgctggccgcggccaacccgtcgccg
cagaccgagctcgagttcaccagcgtcttcgagctgctgtgcgcggtgctgctgtcggcg
caggccaccgacgccggcgtcaacaaggcgacgaagcgcctgttcgcgctggcgccgacg
ccgcagcgcatgctggatctggggctggagcaggtcaccgagctgatccgcacgatcggc
ctgttccgcaccaaggcgaagaacctggtccagacctgccgcatcctcgtcgagcagcac
ggcggcgcggtgccgcgctcgcgcgaagcgctggaggcgctgcccggcgtcggccgcaag
acggccaacgtcgtgctcaacgtcgccttcggcgagccgacgatggcggtggacacgcac
atcttccgcgtcgccaaccgcaccgggctggcgccgggcaagaacccgctggccgtcgag
ctgaagctgctggagcgcgtgccggcgaagtacgcggtcgacgcgcaccactggctgatc
ctgcacggccgctacgtctgccaggcgaggcggccgcagtgcgaacgctgcgcggtgcgc
cgctggtgtgacaccgctgcttctacaatgcccgcggagggatag
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