Rubrivivax gelatinosus: RGE_32240
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Entry
RGE_32240 CDS
T01803
Name
(GenBank) inner membrane efflux protein
KO
K18138
multidrug efflux pump
Organism
rge
Rubrivivax gelatinosus
Pathway
rge01501
beta-Lactam resistance
rge01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGE_32240
01503 Cationic antimicrobial peptide (CAMP) resistance
RGE_32240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rge02000
]
RGE_32240
01504 Antimicrobial resistance genes [BR:
rge01504
]
RGE_32240
Transporters [BR:
rge02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RGE_32240
Antimicrobial resistance genes [BR:
rge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGE_32240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF4232
PfNDH2_hel_ins
Motif
Other DBs
NCBI-ProteinID:
BAL96563
UniProt:
I0HU76
LinkDB
All DBs
Position
complement(3437577..3440744)
Genome browser
AA seq
1055 aa
AA seq
DB search
MARFFIDRPVFAWVIALFILVFGGVAITQLPISQYPPVAPPSIVVQTSYPGASAQTLEDS
VLSVIEREMNGSPGLIYMESVAQADGSGSITLSFEPGTNPDLAQVDVQNRLSRATPRLPQ
AVTQQGVRVDKSRSNFLLFTILSSDNPAYDPVALGDYASRNVLPELQRVPGVGQAQLFGT
ERAMRIWIDPAKLVGYKLSTADVNAAISAQNAQVASGTIGDRPNVPGQPIFATVVVDGQL
KTVEQFGNIVLRANADGSTVRLKDVARVELGAQGYATQARLNGKASTGIGVQLSPSGNAM
ATAKAVKQRLDELSKYFPQGVKATIPYDSSKFVDISIKQVVETLVEAVFLVFLVMFLFLQ
NIRYTIIPTLVVPISLLGTFAVLLGLGFSINVLTMFGMVLVIGIVVDDAIVVIENVERIM
STEGLPPRAATRKAMGQISGAIVGVTVVLVSVFVPLAFFSGAVGNIYRQFSAVMVASILF
SAFMALSFTPALCATFLKPVEAGHHMEKGGFFGWFNRTFARTARGYEGRVAWVLRRGGRM
LIIYAAIAGALALFMARLPTSFLPNEDQGTLIVNVQLPPGATTERTSAVMSQVEDFMLKQ
PEVNSMVSVLGFSFSGSGQNAALGFVTLKDWKDRDLKSGSAQALVGRAFGALSQIRDAFI
FPVSPPPIPELGTASGFAFRLQDRGGNGHEALLAARNQLLFMASQSKVLAGVRPEGLEDA
PQLKLNIDREKAAALGVGFSAINSALSTSLGSSYVNDFPNAGRMQRVVVQADAPARMQPE
DLLRINAVNSAGKPVPLSAFTTTEWISGPMQTVRYNGYPAMRLAGAAAPGYSTGDALAEM
ERLAGQLPPGFAYEWTGTSREEKLSGSTATILFAFSLLAVFLCLAALYESWSIPLSVILV
VPLGVVGVALATMLRGFENDVYFKVGLITIIGLSAKNAVLIIEFAKDLHAQGKSLVESAL
EAAHLRFRPIIMTSMAFILGVLPLAISHGAGSASQNSIGTGVMGGMVTATMLSVFFTPLF
FVLVRKLFKGSERQRRMYAHETSDGEQAAANEEKK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttcttcatcgaccgccccgtcttcgcgtgggtgatcgcgctgttcatcctg
gtcttcggcggcgtcgcgatcacgcagctgccgatctcccagtaccccccggtcgcaccg
ccgtcgatcgtcgtccagacctcgtacccgggcgcctcggcacagacgctggaagacagc
gtgctgagcgtcatcgagcgcgagatgaacggctcgccgggcctgatctacatggagtcg
gtcgcgcaggccgacggcagcggctcgatcacgctgagcttcgagccgggcaccaacccc
gacctggcccaggtggacgtgcagaaccgcctgagccgcgccacgccgcggctgccgcag
gcggtgacgcagcagggcgtgcgcgtcgacaagtcgcgctcgaacttcctgctgttcacg
atcctgtcctcggacaacccggcctacgatccggtggcgctgggcgactacgcctcgcgc
aacgtgctgcccgaactgcagcgcgtgcccggcgtcggccaggcgcagctgttcggcacc
gaacgcgcgatgcgcatctggatcgacccggccaagctcgtcggctacaagctgtcgacc
gccgacgtcaacgcggcgatctcggcgcagaacgcgcaggtcgcctcgggcacgatcggt
gaccggccgaacgtgccgggccagccgatcttcgccaccgtcgtcgtcgacggccagctc
aagaccgtcgagcagttcggcaacatcgtgctgcgcgccaacgccgacggctcgaccgtt
cggctgaaggacgtcgcacgcgtcgagctcggcgcccagggctacgccacgcaggcgcgc
ctgaacggcaaggcctcgaccggcatcggcgtgcagctctcgccgtcgggcaacgcgatg
gccacggccaaggccgtcaagcagcgcctggacgagctgtcgaagtacttcccgcagggc
gtgaaggcgacgatcccgtacgacagctcgaagttcgtcgacatctcgatcaagcaggtc
gtcgagaccctcgtcgaggcggtgttcctcgtgttcctcgtgatgttcctgttcctgcag
aacatccgctacacgatcatcccgacgctggtcgtgccgatctcgctcttgggcaccttc
gcggtgctgctggggctgggcttctcgatcaacgtgctgacgatgttcggcatggtgctg
gtcatcggcatcgtcgtcgacgacgcgatcgtcgtcatcgagaacgtcgagcgcatcatg
agtaccgagggcctgccgccacgcgccgcgacgcgcaaggcgatgggccagatctcgggc
gccatcgtcggcgtcaccgtcgtgctggtctcggtgttcgtgccgctggccttcttcagc
ggtgccgtcggcaacatctaccgccagttctcggcggtgatggtggcctcgatcctgttc
tcggccttcatggcgctgtcgttcacgccggcgctgtgcgcgaccttcctgaagcccgtc
gaagccggccaccacatggaaaagggcggcttcttcggctggttcaaccgcaccttcgcg
cgcaccgcgcgcggctacgaaggccgcgtggcctgggtgctgcgtcgcggcggccgcatg
ctgatcatctacgcggcgatcgccggcgcgctggcgctgttcatggcgcggctgccgacc
tcgttcctgccgaacgaggaccagggcacgctgatcgtcaacgtgcagctgccgccgggc
gcgaccaccgagcgcaccagcgcggtgatgagccaggtcgaggacttcatgctcaagcag
cccgaggtcaacagcatggtcagcgtgctgggcttcagcttctcgggcagcggccagaac
gcggcgctgggcttcgtgacgctgaaggactggaaggaccgcgacctgaagagcggctcg
gcgcaggcgctcgtgggccgcgcgttcggcgcgctgtcgcagatccgcgatgccttcatc
ttcccggtgagcccgccgccgatccctgaactgggcacggccagcggcttcgcgttccgg
ctgcaggaccgcggcggcaacggccacgaggccctgctggcggcgcgcaaccagctgctg
ttcatggcctcgcagagcaaggtgctcgccggcgtgcgccccgaaggcctggaagacgcg
ccgcagctcaagctcaacatcgaccgcgagaaggcggcggcgctgggcgtgggcttctcg
gcgatcaacagcgcgctgtcgacctcgctgggctcgtcctacgtcaacgacttcccgaac
gccggccgcatgcagcgtgtcgtcgtccaggccgatgcgcccgcgcgcatgcagcccgag
gacctgctgcgcatcaacgcggtcaacagcgccggcaagccggtgccgctgtcggcgttc
acgacgaccgagtggatctccggcccgatgcagacggtgcgctacaacggctacccggcg
atgcgcctggccggcgctgcggcgcccggctacagcaccggcgacgcgctggccgagatg
gagcgcctggccggccagctgccgcccgggttcgcctacgagtggaccggcacctcgcgc
gaggagaagctctcgggctcgacggcgacgatcctgttcgcgttctcgctgctggcggtg
ttcctctgcctggcggcgctgtacgagagctggtcgatcccgctgtcggtgatcctcgtc
gtgccgctgggcgtcgtcggcgtcgcgctggcgacgatgctgcgcggcttcgagaacgac
gtgtacttcaaggtcggcctgatcacgatcatcggcctgtcggcgaagaacgcggtgctg
atcatcgagttcgcgaaggatcttcacgcccagggcaagagcctggtggagtcggcgctg
gaagcggcgcacctgcgcttccggccgatcatcatgacctcgatggccttcatcctgggc
gtgctgccgctggcgatctcgcacggcgcgggctcggcgagccagaactcgatcggcacc
ggcgtgatgggcggcatggtcaccgcgacgatgctgtcggtgttcttcacgccgctgttc
ttcgtgctggtgcgcaagctgttcaagggcagcgaacggcagcggcgcatgtacgcgcac
gagaccagcgacggcgaacaggccgccgccaacgaggagaagaagtga
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