Mediterraneibacter gnavus: RGna_04720
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Entry
RGna_04720 CDS
T06719
Name
(GenBank) triose-phosphate isomerase
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00010
Glycolysis / Gluconeogenesis
rgn00051
Fructose and mannose metabolism
rgn00562
Inositol phosphate metabolism
rgn00710
Carbon fixation by Calvin cycle
rgn01100
Metabolic pathways
rgn01110
Biosynthesis of secondary metabolites
rgn01120
Microbial metabolism in diverse environments
rgn01200
Carbon metabolism
rgn01230
Biosynthesis of amino acids
Module
rgn_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
rgn_M00002
Glycolysis, core module involving three-carbon compounds
rgn_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RGna_04720
00051 Fructose and mannose metabolism
RGna_04720
00562 Inositol phosphate metabolism
RGna_04720
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RGna_04720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rgn04147
]
RGna_04720
Enzymes [BR:
rgn01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
RGna_04720
Exosome [BR:
rgn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
RGna_04720
Exosomal proteins of bladder cancer cells
RGna_04720
Exosomal proteins of melanoma cells
RGna_04720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
TsaD
Motif
Other DBs
NCBI-ProteinID:
QHB22847
LinkDB
All DBs
Position
complement(916359..917108)
Genome browser
AA seq
249 aa
AA seq
DB search
MSRKKIIAGNWKMNKTPSEAVALVEELKPLVANEEVDVVFCVPAIDIVPVVEAVKGTNIQ
VGAENMYFEESGAYTGEISPAMLVDAGVKYVVLGHSERRDYFGETNEDVNKKVLKAFEHG
ITPIMCCGETLEQREQGVTMDFIRQQVKVGFQNVTADQAKTAVIAYEPIWAIGTGKTATT
EQAQEVCKGIRECIAEVYDEATAEAIRIQYGGSVNAATAPELFAQPDIDGGLVGGASLKA
DFGQIVNYK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaagaaaattatcgcaggaaactggaaaatgaacaaaactccaagcgaagca
gttgcattagtagaagagttaaaaccactggtagcaaatgaagaagtagatgttgtattc
tgtgtaccggctatcgatatcgtaccggttgtagaagccgtaaaaggaacaaacatccag
gttggagcagaaaacatgtacttcgaagagagcggagcttacacaggagagatctctccg
gctatgctcgtagatgcaggagtaaaatacgttgtacttggacattctgagagaagagat
tacttcggtgagacaaacgaagatgtcaacaaaaaagtcctgaaagcatttgagcacggt
attacaccgatcatgtgctgtggagagactctggagcagagagaacagggcgtaacaatg
gatttcattcgccagcaggtaaaagttggattccagaatgtaacagctgatcaggcaaaa
actgcagtgatcgcttatgagccaatctgggcaatcggaacaggaaaaacagctacaaca
gagcaggctcaggaagtttgcaaaggaatccgtgagtgcatcgctgaagtttatgatgaa
gctacagcagaagcaattcgcattcagtacggcggatctgtaaacgctgcaacagctcct
gaattatttgcacagccggatattgatggaggactcgtaggtggagcttctcttaaagct
gatttcggacagattgtcaactacaaatag
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