Mediterraneibacter gnavus: RGna_11295
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Entry
RGna_11295 CDS
T06719
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RGna_11295
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rgn01007
]
RGna_11295
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgn03016
]
RGna_11295
Enzymes [BR:
rgn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
RGna_11295
Amino acid related enzymes [BR:
rgn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RGna_11295
Transfer RNA biogenesis [BR:
rgn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RGna_11295
Prokaryotic type
Other AARSs
RGna_11295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Zn_ribbon_CLPX_N
tRNA-synt_1_2
PRA-CH
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QHB24024
LinkDB
All DBs
Position
complement(2262174..2265329)
Genome browser
AA seq
1051 aa
AA seq
DB search
MYKKVSTDMNFVGREKEVEAFWKEHDIFQKSMEEKEGCPEYTFYDGPPTANGKPHIGHVL
TRVIKDMIPRYRTMKGYKVPRKAGWDTHGLPVELEVEKLLGLDGKDQIEGYGLEPFIDKC
KESVWKYKGMWEDFSSTVGFWADMEHPYVTYDNNFIESEWWALKQIWDKKLLYKGFKIVP
YCPRCGTPLSAQEVAQGYKDVKERSAIVRFKVKNEDAYILAWTTTPWTLPSNLALCVNPS
ETYVKVKAADGYVYYMAEALLNTVLGKLAEEGTPAYEVLETYVGKDLEYKEYEPLYQCAA
DSAEKQHKKAFYVTCDNYVTLTDGTGVVHIAPAFGEDDANVGRNYELPFVQLVDEKGDMA
AETPFAGVFVKKADPMVLKDLDERGLLFDAPKFEHSYPHCWRCDTPLIYYARESWFIKMT
AVKEDLIANNNTINWIPENIGKGRFGDWLENVQDWGISRNRYWGTPLNIWECECGHMHSI
GSIAELKEMSDNCPDDIELHRPYIDDVTITCPECGKQMHRVPEVIDCWFDSGSMPFAQHH
YPFENEDLFKQQFPADFISEAVDQTRGWFYSLLAISTLLFNKAPYKNVIVLGHVQDENGQ
KMSKSKGNAVDPFDALETYGADAIRWYFYSNSAPWLPNRFHGKAVVEGQRKFMGTLWNTY
AFFVLYANIDGFDATKYTLEYDKLGVMDKWLLSKLNTLTKTVDEHLANYRIPESARALQD
FVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVTVSKVAAPMIPFMTEEIYQNLV
KSVDASAPESIHLCDYPEVQNELIDEKLEADMDNVLKLVVMGRACRNASNIKNRQPIGQM
FVKAGFDLPEFYQEIVADELNVKNVKFTDDVRDFTSYSFKPQLKTVGPKYGKMLGGIKAA
LDQLDGNAAMDEINETGSLKLDINGQEVTLFKEDLLIDTAQIEGYVSENDNGITVVLDTN
LTEELLEEGFVREIISKIQTMRKEAGFEVMDKIKVTYKGSEKAEAVFAANGTQICSEVLA
VSAEKAEPAGFVKEWKINGEAVFMGVEKEGR
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagaaagtttccacggatatgaatttcgtaggacgtgaaaaagaagttgaagca
ttctggaaagagcatgatatcttccagaaaagtatggaggaaaaagaaggatgtccggag
tacaccttttacgacggacctccgacagcaaacggaaaaccgcatatcggtcacgttctg
acacgtgttatcaaagatatgatcccgagataccgcacaatgaagggatacaaggttcct
cgtaaagcaggatgggatacccatggtctgccggtagagctggaagtagaaaagctgctt
ggtctggacggaaaagatcagattgaaggatacggactggagccgtttatcgacaaatgt
aaagagagcgtatggaaatacaaaggaatgtgggaggatttctccagcacggttggattc
tgggcagatatggagcatccttatgtaacatacgacaacaatttcatcgaatccgagtgg
tgggcattgaaacagatctgggacaaaaagctcctctacaaaggatttaagattgtacct
tactgccctcgctgcggaactccgttgtctgcgcaggaagtggcacagggatacaaggat
gtgaaagagcgttctgcaatcgtaagatttaaggtaaaaaacgaagacgcatacattctg
gcatggacaacaacaccttggacactgccgtcaaaccttgcactttgtgtaaatccaagt
gagacttatgtaaaagtaaaagcagcagacggttatgtatattacatggcagaggcactt
cttaatacggttcttggaaagcttgcagaagaaggaacaccggcttatgaggttctggag
acatatgtaggaaaagatctggaatacaaagagtatgagccattgtaccagtgtgcagct
gacagtgcagagaaacagcataaaaaagcattttatgtgacatgtgataactacgttaca
ttgacagacggtaccggagtcgttcatattgcgcctgcatttggtgaggacgatgcaaat
gtcggaagaaattatgaactcccgtttgtacagcttgtagatgaaaaaggggatatggca
gcagagactccgtttgcaggagtatttgtgaaaaaggcagatccgatggtactcaaagat
ctggatgagagaggacttctctttgacgctccgaaatttgagcacagctatccgcactgc
tggagatgtgatactccgctgatctactacgcacgtgagtcctggttcatcaagatgacg
gctgtaaaagaagatctgattgcaaacaacaacacaatcaactggattccggaaaacatc
ggaaaaggacgtttcggagactggcttgaaaacgttcaggactggggaatcagccgtaac
cgttactggggaacaccgctgaatatctgggagtgtgaatgcggacatatgcactctatt
ggaagcattgcagaattaaaagagatgtctgataactgtccggatgatatcgaactgcac
cgtccatatatcgacgatgtgacgattacttgtccagagtgtggaaaacagatgcaccgt
gtaccggaagtgattgactgctggtttgacagtggttccatgccgtttgcacagcaccac
tatccgtttgagaacgaagatttgttcaaacagcagttcccggcagactttatttccgag
gcggtagaccagacaagaggatggttctactctctgcttgcgatttctacattgctgttt
aacaaagcgccatacaagaatgttatcgttcttggacatgtgcaggatgagaacggacag
aagatgagtaagtccaaaggaaacgcggtcgatccatttgacgcactggagacatacgga
gcagatgcgatccgctggtacttctacagcaacagtgcaccatggcttccaaaccgtttc
cacggaaaagcagttgtagaaggacagcgtaaattcatgggaactctgtggaacacatac
gcattcttcgtactgtatgcaaatattgatggatttgacgcaacaaaatatacactggaa
tatgataaattaggagtcatggataaatggcttctgtccaaactgaatacactgacaaaa
acagtggatgagcatctggcaaactacagaattccggaaagtgcaagagcactgcaggat
ttcgtggatgacatgagtaactggtatgtcagaagaagccgtgagcgtttctgggcaaaa
ggaatggaacaggataagatcaatgcgtacatgacattgtacactgcgcttgtgacagta
tcgaaagttgctgcgccgatgatcccgttcatgacagaagaaatctaccagaacctggtg
aagagtgttgatgcatccgctccggaaagtatccacctttgtgattatccggaggttcag
aacgaactgatcgatgaaaaactggaagcagatatggacaatgtattaaaactggttgtc
atgggccgtgcatgccgtaacgcatccaacatcaaaaaccgtcagccgatcggacagatg
ttcgtgaaagcaggattcgatctgccggaattttatcaggagatcgtggcagatgagctg
aatgtaaaaaatgtaaaatttacagatgatgtaagagactttacttcttatagttttaaa
ccacagttaaagacagtcggaccaaaatatggtaaaatgttgggtggaatcaaagctgcg
ttagaccagctcgatggcaatgcagcaatggatgagattaacgaaacaggttctctgaaa
ctggatattaacggacaggaagtaacactgttcaaagaagatttgttgatcgatactgca
cagattgaaggatatgtttctgaaaatgacaatggaatcaccgttgttctggatacaaat
ctgacagaagagcttctggaggaaggatttgtaagagagatcatcagtaagatccagaca
atgagaaaagaagccggatttgaagtgatggataagatcaaagtgacctacaaaggaagc
gaaaaggcagaggcagtcttcgcagcgaacggtacacagatctgttctgaggttctggca
gtttctgcagaaaaagcagagccggccggattcgtaaaagaatggaagattaatggagaa
gctgttttcatgggagtcgaaaaagaagggagataa
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