Mediterraneibacter gnavus: RGna_12640
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Entry
RGna_12640 CDS
T06719
Name
(GenBank) D-Ala-D-Ala carboxypeptidase VanY
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00550
Peptidoglycan biosynthesis
rgn01100
Metabolic pathways
rgn01502
Vancomycin resistance
rgn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGna_12640
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGna_12640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RGna_12640
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rgn01002
]
RGna_12640
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
RGna_12640
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rgn01504
]
RGna_12640
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
RGna_12640
Peptidases and inhibitors [BR:
rgn01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RGna_12640
Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RGna_12640
Antimicrobial resistance genes [BR:
rgn01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RGna_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Peptidase_M15_4
Peptidase_M15_2
G0-G1_switch_2
LapA_dom
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
QHB24251
LinkDB
All DBs
Position
2550165..2550956
Genome browser
AA seq
263 aa
AA seq
DB search
MARVNRKAKKILITGMILGAAAGILLTFLAANSKMHDKNDEIKTVKAKYEKEAKSLKKQL
KEAKNEQKEVNLQSNEWNLLLVNSSYPLAADYSPELTAVDDEDHKVDSRIVESVNKMLQD
AKTAGMNLKIISAYRSYDDQKNVFNDTMQSWLSQGYSYLDSYDETKKSVAVPGTSEHATG
LALDITSESNQTLDETQAQTQEQQWLMKNCQNYGFILRYPKDKTDITQYIYEPWHYRYVG
EEAAKAIMEKGITLEEYLAQIQK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagtaaatcgaaaagcgaaaaaaatactgatcacagggatgatccttggagcg
gcagcagggattttgctcacatttctggcagcaaacagcaagatgcatgacaaaaatgat
gagatcaaaactgtcaaggcaaagtatgaaaaagaagcgaaatctttgaagaagcagctg
aaggaagcaaagaatgagcaaaaagaagtaaacctgcagtcaaatgaatggaatctgctc
ctggtgaacagttcttatccgcttgcagcagactattcaccggaattgacggctgtagat
gatgaagatcataaagtagactcccggattgtagagtctgtaaataaaatgcttcaggat
gcgaaaacagcggggatgaatctgaagatcatttcagcataccgttcgtatgatgatcag
aagaatgtgttcaatgataccatgcagtcatggctcagtcagggatattcgtatttagat
tcttacgatgagacgaaaaagtctgtagcagttccgggaacaagtgaacatgcaacgggg
cttgcactggatatcacatctgagtcgaaccagacactggatgagacacaggcacagacg
caagagcagcagtggctgatgaagaactgccagaattatggatttattctgcgttatccg
aaggataagacagatataacccagtatatttatgagccgtggcattaccgctatgtggga
gaagaggctgcaaaggcgatcatggaaaaaggaattacgctggaagaatatctggcacag
atacaaaaataa
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