Mediterraneibacter gnavus: RGna_12675
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Entry
RGna_12675 CDS
T06719
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGna_12675 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_12675 (nth)
Enzymes [BR:
rgn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RGna_12675 (nth)
DNA repair and recombination proteins [BR:
rgn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGna_12675 (nth)
Prokaryotic type
RGna_12675 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QHB24256
LinkDB
All DBs
Position
2556713..2557339
Genome browser
AA seq
208 aa
AA seq
DB search
MKKRTKEILAILDEQYGREYVCYLNYETPWQLLIATMLSAQCTDARVNIVTADLFQKYDT
LEKFANADLKELEQDIKPTGFYHNKAKNIIACTRDLLYRFGGEVPRSLEDLTSLAGVGRK
TANVIRGNIYHDPSVVVDTHVKRISRRLGLTKNEDPEKIETDLMKELPKDHWILYNIQII
TFGRSICTARSPKCEQCFLQKYCKEFKM
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacggacaaaagaaattttagcgattctggatgagcagtatggacgggagtac
gtctgttatctgaattatgagacaccgtggcagcttctgattgcaaccatgctgagtgca
cagtgtacggatgcaagagtaaatattgtgacggcagatctgtttcagaaatatgataca
ctggagaagtttgccaatgcggatttaaaagagctggaacaagatatcaagccgaccgga
ttctaccacaataaggcgaaaaatatcattgcctgtaccagagatctgctgtacagattc
ggtggtgaagtgcctaggagtctggaggatctgacttctctggcaggtgtcgggcgaaag
acggcgaatgtgatccggggaaacatctatcatgatccgagtgtggtggtagatacacat
gtaaaacggatatccagacgccttggcctgacaaaaaacgaagatccggaaaagattgaa
acggatctgatgaaagaactgccaaaagatcactggatcttatataatattcagatcatt
actttcggacggtcgatttgtacggcaagaagtccaaaatgtgagcagtgcttcttgcaa
aaatactgcaaagagtttaaaatgtaa
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