Rodentibacter haemolyticus: IHV77_10235
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Entry
IHV77_10235 CDS
T07810
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
rhae
Rodentibacter haemolyticus
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhae03009
]
IHV77_10235 (rlmC)
Enzymes [BR:
rhae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
IHV77_10235 (rlmC)
Ribosome biogenesis [BR:
rhae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IHV77_10235 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_12
Methyltransf_25
Methyltransf_32
UPF0020
Cons_hypoth95
Methyltransf_4
Methyltransf_11
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QPB43723
UniProt:
A0ABX6V0C4
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All DBs
Position
2136256..2137431
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AA seq
391 aa
AA seq
DB search
MISCHHYQAGSCRSCKWLDVPYERQLSEKITNLQTQLSDLKYDNLTWLPPFQSSENAFRN
KAKMVVSGAVERPILGILQDPDNPQSAVDLCDCPLYPKHFQDIFPILKDFIGRAGLVPYN
VAKQKGELKYILLTESAATGKLMLRFVLRSENKLALIRRELSGLLAKLPQLEVVSVNLQP
QHAAILEGEKEIFLTEQQLLAENFNDVPLFIRPQGFFQTNPYVASGLYETAQQWIKNLPV
TSLWDLFCGVGGFGLHCVKALQENRSHSIELTGIEISASAILAAKTSAQKLGLQNIKFQS
LDAANFALNQNERKPDLVIVNPPRRGIGKPLSEFLNEMQPRFILYSSCNAASMRKDLRHL
THYNARKIRLFDMFPHTAHYEVLMLLERTSY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttgtcaccattatcaagcaggtagttgtcgttcatgtaaatggcttgatgtg
ccttatgagcggcagctttccgaaaaaataacgaatcttcaaactcaactttctgatttg
aaatacgataatttaacatggttgccgccttttcaatcctcagaaaacgcattccgtaat
aaagccaaaatggtggtaagcggtgcagtggaacgtccgatcctcggtattttgcaagat
ccggataatccgcaaagtgcggtggatttatgtgattgcccgctttatcctaagcatttt
caagatatttttcctattctcaaggattttattggaagagcagggcttgtgccttataac
gtggcaaaacaaaagggtgaattgaaatatattttacttacggaaagtgcagcaacgggt
aaattaatgcttcgttttgtcttgcgatctgaaaataaattagcgcttattcgccgtgag
ttatcaggattattggctaaattaccgcaattagaagtcgtaagtgtaaatttacagcca
cagcatgccgctattttagagggagaaaaagagatttttctgaccgaacagcaactatta
gctgagaattttaatgatgtaccactatttattcgtcctcaaggattttttcaaactaat
ccgtatgtcgcttcagggttatacgaaacagctcaacagtggataaaaaatctgccggta
acttcattatgggatctcttttgtggcgtaggtggttttggtttgcattgtgtaaaagca
ttacaggaaaaccggagccattctattgaacttacaggaatcgagatttccgcttccgct
attttggccgctaaaacatccgcacaaaaattaggattacaaaatattaaatttcaatct
ttagatgcggcgaattttgcgttaaatcagaatgaacgtaagcctgatttggttatcgtc
aatccgccacgccgcggcattggtaaacctctaagtgaatttcttaacgaaatgcaaccg
cgttttattttgtattccagctgtaatgccgcctctatgagaaaagacttacggcattta
actcattataacgcaagaaaaatccgactctttgatatgtttccacatacggcgcactat
gaagtgttgatgctgttggaacgaacttcctactaa
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