KEGG   Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_000039
Entry
RHABOEDO_000039   CDS       T07398                                 
Name
(GenBank) Endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rhaw  Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhaw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RHABOEDO_000039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhaw03400]
    RHABOEDO_000039
Enzymes [BR:rhaw01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RHABOEDO_000039
DNA repair and recombination proteins [BR:rhaw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RHABOEDO_000039
 Prokaryotic type
     RHABOEDO_000039
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: QYF47966
LinkDB
Position
44569..45222
AA seq 217 aa
MNKKKHAQRIQDILHHLFPDPEIPLQYRDPYTLLIAVVLSAQNTDKKVNQVTPALFAKAS
TPQQMLNLSIEEIASIIKPCGLSNIKARSIWNLSKILVEQHKGRVPNSLLALEKLPGVGH
KTASVVVSQGFGKPAFPVDTHIHRCAKRWLLSRGKTVEETEKDLKHLFPKKSWNKLHLQM
IYFAREYCPARGHKKEACPICQWIDEPSDCPMSPRTS
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaacaaaaaaaaacacgcacaacgcattcaagatattttacatcatttatttcccgat
cctgagattcccttgcagtatcgagatccttatactttattaattgcagttgtcttatct
gcacaaaatacagataaaaaagtaaatcaagtaactcctgctttatttgcaaaagcctct
acccctcaacaaatgcttaacttaagcatagaagaaattgctagcataattaaaccatgt
ggcttaagtaatataaaagcaagatctatctggaatctctctaaaatccttgttgagcaa
cataaaggtagagtcccaaactctttattggctttagaaaaactccctggggtggggcat
aaaaccgcatcagttgtcgtatcacaaggatttggcaagcccgctttccctgtagataca
catattcatcgctgtgcaaaaaggtggcttttaagtcggggaaaaaccgtggaggaaaca
gaaaaagacctcaaacatctttttcctaaaaaaagctggaataaactccatttgcaaatg
atctattttgcaagagagtattgtcctgctcgcggtcataaaaaagaggcatgtcccatc
tgtcaatggatcgatgagcctagcgattgccccatgagtccgcgcacctcttga

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