Rhodanobacter denitrificans: R2APBS1_2129
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Entry
R2APBS1_2129 CDS
T02495
Name
(GenBank) triosephosphate isomerase
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00010
Glycolysis / Gluconeogenesis
rhd00051
Fructose and mannose metabolism
rhd00562
Inositol phosphate metabolism
rhd00710
Carbon fixation by Calvin cycle
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01120
Microbial metabolism in diverse environments
rhd01200
Carbon metabolism
rhd01230
Biosynthesis of amino acids
Module
rhd_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
rhd_M00002
Glycolysis, core module involving three-carbon compounds
rhd_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
R2APBS1_2129
00051 Fructose and mannose metabolism
R2APBS1_2129
00562 Inositol phosphate metabolism
R2APBS1_2129
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
R2APBS1_2129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhd04147
]
R2APBS1_2129
Enzymes [BR:
rhd01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
R2APBS1_2129
Exosome [BR:
rhd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
R2APBS1_2129
Exosomal proteins of bladder cancer cells
R2APBS1_2129
Exosomal proteins of melanoma cells
R2APBS1_2129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
Motif
Other DBs
NCBI-ProteinID:
AGG89246
UniProt:
M4NNG7
LinkDB
All DBs
Position
complement(2282804..2283571)
Genome browser
AA seq
255 aa
AA seq
DB search
MRKKFVAGNWKMHGSRSMAKALVDDIASSMPNDIDVAVFPPFPYVAELAWQHAESGLGIG
AQDVSEHEGQGAYTGEVSATMLADVGTQWVLVGHSERRQYHGESDELVARKFAAARAGGL
TPILCLGETLEQREASETEAVIARQLRAVLALNGVASFDTAVIAYEPVWAIGTGRTASPE
QAQQVHAFIRSQLEKEDVMIARLTRLLYGGSVKAANAAELFAQADVDGGLIGGASLAASD
FLGICAAAHQAPQAQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagaaattcgtcgccggaaactggaaaatgcacggcagccgttcgatggccaag
gccttggtggacgacattgccagcagcatgccgaacgacatagacgtggcggtattccct
ccgtttccctacgtggccgaactggcttggcagcatgccgagtccggcctgggcatcggc
gcacaggatgtcagcgagcacgaggggcagggcgcgtataccggtgaagtctccgccacg
atgctagcggacgtcggcacgcaatgggtgctggtcggtcattccgaacggcgccaatac
catggcgagagcgacgaactggttgcgcgcaagtttgccgcggcccgtgccggcggcctg
acgccgatcctgtgcctgggcgaaacgctggaacagcgcgaagccagcgagaccgaggcg
gtcatcgcgcggcaattgcgggcggtgctggcactcaatggcgtggccagtttcgacacc
gcggtgattgcctacgagccggtctgggcgatcggcaccggccgcaccgccagcccggag
caagcgcagcaggtacacgccttcattcgtagccaactggaaaaagaagatgttatgatt
gcccgtctgacccggctgctttacggcggtagcgtcaaggcggccaatgccgcggaattg
ttcgcgcaggcggacgtggatggagggctgatcggcggggcctccctggccgcatccgac
ttccttggaatctgcgccgcggcgcatcaggcgccacaggctcaatag
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