Rhodococcus sp. DMU1: HFP48_03295
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Entry
HFP48_03295 CDS
T11419
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HFP48_03295 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhdm03400
]
HFP48_03295 (nth)
Enzymes [BR:
rhdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HFP48_03295 (nth)
DNA repair and recombination proteins [BR:
rhdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HFP48_03295 (nth)
Prokaryotic type
HFP48_03295 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QIX48672
LinkDB
All DBs
Position
711730..712524
Genome browser
AA seq
264 aa
AA seq
DB search
MEQVHATPSESPDVRRRRVSGGERKPESRLALVRRARRMNRRLAEAFPHVYCELDFTTPL
ELAVATILSAQCTDVRVNQVTPALFARYPDARAYAEADRAELEEYIRPTGFYRNKANSLI
GLGQALLERFDGEVPRRLEDLVTLPGFGRKTANVVLGNAFDIPGITVDTHFQRLVHRWKW
TEETDPVKIEHAVGALVDRKEWTLLSHRVIFHGRRVCHARKPACGICVLAKDCPSYGIGP
TDPVTAAALVKGPETEHLLELAGR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtggagcaggtgcatgcgaccccgtccgagagtcccgacgtgcgccgacgacgcgtgtcc
ggaggcgagcggaaacccgagagcaggctcgccctggtgcggcgggcccgccgcatgaac
cggcggctcgccgaggcgttcccccacgtgtactgcgaactcgacttcaccacgccgctc
gagctggcggtcgccacgatcctgtccgcgcagtgcaccgacgtgcgggtcaaccaggtc
accccggccctgttcgcccgctacccggacgcccgcgcctacgcggaggccgaccgggcc
gagctcgaggagtacatccggcccaccggtttctaccgcaacaaggccaactccctgatc
ggcctcggacaggccctgctcgagcggttcgacggcgaggtaccgcgccgcctcgaggat
ctcgtcacacttcccggattcggccgcaagactgccaacgtggtcctcggcaacgcgttc
gacatccccggcatcaccgtcgacacccacttccagcgtctcgtgcaccgctggaagtgg
accgaggaaaccgaccccgtcaagatcgaacacgccgtcggcgcgctcgtcgaccgcaag
gaatggaccctgctctcgcaccgggtgatcttccacggccggcgcgtctgccacgcccgc
aaacccgcctgcggcatctgcgtgctggccaaggactgcccgtcctacggcatcggaccc
accgaccccgtgaccgccgccgcgctggtgaagggaccggagaccgagcacctgctcgaa
ctggccggacggtga
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