Rhodococcus sp. DMU1: HFP48_15845
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Entry
HFP48_15845 CDS
T11419
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HFP48_15845
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhdm01007
]
HFP48_15845
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhdm03016
]
HFP48_15845
Enzymes [BR:
rhdm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
HFP48_15845
Amino acid related enzymes [BR:
rhdm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HFP48_15845
Transfer RNA biogenesis [BR:
rhdm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HFP48_15845
Prokaryotic type
Other AARSs
HFP48_15845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1_2
DUF6128
Motif
Other DBs
NCBI-ProteinID:
QIX50871
LinkDB
All DBs
Position
complement(3452433..3455594)
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AA seq
1053 aa
AA seq
DB search
MTKSTPDRPQAPDAPTGGYPRVDYGVAKDSGIDFPELEVKVLDGWAKDDTFRASVANRDG
ADEFVFYDGPPFANGLPHYGHLLTGYVKDLIPRFQTMRGKKVERRFGWDCHGLPAELEAE
KQLGIKDKSEIDTMGLAEFNAYCKTSVLRYTGEWRDYVTRQARWVDFDNDYKTLDLDFME
SVMWAFKQLYDKGLIYQGFRVLPYSWYEQTPLSNQETRLDDAYKMRQDPAVTVDMVVRAP
GSELDGANALIWTTTPWTLPSNLAIAVHPDITYVAVRVGEGDDARTYVLAEDRLGHYARE
FGDEPEVLGRYTGADLVGLAYEPPFDFFVGRENAHRIIAADYVTTDSGTGIVHLAPAFGE
EDMEYCQRNGIELVQPLDPGGKFTALVPPYEGLQVFDANPVIIKDLKAAGKLLRHETIEH
SYPHSWRSGRPLIYMAVPSWFVAVTRFRDRMVELNQQITWVPEHIRDGQFGKWLEGARDW
NISRNRYWGSPIPVWVSDDPAYPRVDVYGSLDELERDFGVRPSDLHRPMIDELTRPNPDD
PTGKSTMRRVPEVLDCWFESGSMPFAQVHYPFENTEWFDSHYPGDFIVEYNGQTRGWFYT
LHVLATALFDRPAFKTVAAHGIVLGDDGLKMSKSKGNYPDVNEVFARDGSDAMRWFLMSS
PILRGGNLVVTEQGIREGVRQALLPLWNAWSFLQLYASKPGTWRTDSPHVLDRYILAKLA
ATRDAITDALEVVDIAGACDELRTFSDALTNWYVRRSRSRFWDEDADAIDTLHTVLEVVS
RLAAPMLPLVTEVIWRGLTGGRSVHLADWPAAGDLPADPALVESMDEVRSVCSTVLSLRK
AQKLRVRLPLPQVTVAAPEAHRLQPFAELVQDEVNVKSVELTEDVDAHGRFELVVNARAA
GPRLGKDVQTVIRAVKAGDWSEAADGTVTAAGIALLPEEYTTRLVAAEPESTAALPGGAG
LVVLDSTVTEELEAEGWAKDRIRELQDARRNLGLDVSDRISVVFEVPADRADWALRHREL
IASEVLATSFELAPAGDGALDLGEGVRAAIVKA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaagagcacccccgaccgcccgcaggcccccgacgcaccgaccggcggatacccg
cgcgtcgactacggggtcgccaaggactcgggcatcgacttccccgagctcgaggtgaag
gtcctcgacgggtgggcgaaggacgacaccttccgcgcctcggtcgcgaatcgcgacggc
gccgacgagttcgtcttctacgacggcccgcccttcgcgaacggcctgccccactacggg
cacctgctcaccggctacgtcaaggacctcatcccgcgcttccagacgatgcgcggcaag
aaggtcgaacggcgcttcggctgggactgtcacggcctgcccgccgagctcgaggcggag
aagcagctcgggatcaaggacaagtccgagatcgacacgatggggctggccgagttcaac
gcctactgcaagacgtcggtgctgcggtacaccggggagtggcgcgactacgtcacccgg
caggcccgctgggtggacttcgacaacgactacaagaccctggacctcgacttcatggag
tcggtcatgtgggccttcaagcagctctacgacaagggcctgatctaccagggcttccgg
gtcctgccgtactcgtggtacgagcagaccccgctgtcgaaccaggagacccggctcgac
gacgcctacaagatgcgtcaggacccggccgtcaccgtcgacatggtggtgcgcgcaccg
ggcagcgaactcgacggcgccaacgccctgatctggaccaccacgccgtggacgctgccg
tccaacctcgcgatcgcggtgcaccccgacatcacctacgtcgccgtccgcgtgggcgag
ggtgacgacgcgaggacgtatgtgctcgcggaggaccgactcggtcactacgcccgcgag
ttcggcgacgaacccgaggtgctgggccggtacaccggcgcggacctcgtcggcctggcc
tacgagccgccgttcgacttcttcgtgggccgggagaacgcccaccggatcatcgcggcc
gactacgtcaccaccgactccggcaccggaatcgtccacctggcaccggccttcggtgaa
gaggacatggagtactgccagcgcaacggcatcgagctggtgcagccgctcgatccgggc
ggaaagttcaccgccctcgttccgccctacgagggtctgcaggtcttcgacgccaacccg
gtgatcatcaaggacctcaaggccgccggaaaactgttgcggcacgagacgatcgagcac
tcctacccgcactcgtggcggtccggccggccgctgatctacatggcggtcccgtcgtgg
ttcgtcgccgtgacccggttccgggaccgcatggtggagctgaaccagcagatcacctgg
gtgcccgagcacatccgcgacggccagttcggcaagtggctcgagggtgcccgcgactgg
aacatcagccggaaccgctactggggcagccccatccccgtgtgggtctcggacgatccg
gcctacccgcgcgtcgacgtgtacggctccctcgacgagctcgaacgcgacttcggggtg
cggccgagcgacctgcaccggccgatgatcgacgagctgacccgccccaacccggacgac
ccgaccgggaagtcgacgatgcgccgcgtccccgaggtgctcgactgctggttcgagtcg
gggtcgatgccgttcgcccaggtgcactatccgttcgagaacaccgaatggttcgactcg
cactatcccggcgacttcatcgtcgagtacaacggtcagacccgcggctggttctacacc
ctgcacgtgctcgccaccgcgctgttcgaccgccccgcgttcaagaccgtcgcggcccac
ggcatcgtgctgggcgacgacgggctgaagatgagcaagtccaagggcaactaccccgac
gtcaacgaggtgttcgcccgcgacggctccgacgccatgcgctggttcctgatgtcctcg
cccatcctgcgcggcggcaacctcgtcgtcaccgagcagggcatccgcgagggcgtccgg
caggcgctgctgccgctgtggaacgcgtggagcttcctgcagctgtacgcgtccaagccc
ggcacgtggcgcaccgactcgccgcacgtgctcgaccggtacatcctggccaagctcgcc
gccacccgcgacgccatcaccgacgcgctcgaggtggtcgacatcgccggagcatgcgac
gagctgcgtaccttcagcgacgccctcaccaactggtacgtgcgccgctcccgcagccgg
ttctgggacgaggacgccgacgcgatcgacaccctgcacacggtgctcgaggtcgtcagc
cgcctcgccgcccccatgctgccgctggtcaccgaggtgatctggcgcggcctgaccggc
ggccgctccgtgcatctggcggactggccggccgccggggacctgccggccgacccggcc
ctggtcgagtcgatggacgaggtccgctcggtgtgctcgacggtgctgtcgctgcgcaag
gcccagaagctgcgcgtgcggctgccgctcccgcaggtcaccgtcgccgcccccgaggcg
caccggctgcagccgttcgccgagctcgtccaggacgaggtcaacgtcaagtcggtcgag
ctgaccgaggacgtcgatgcgcacggccgcttcgagctggtcgtcaacgcccgggccgcg
ggaccgcgcctcggcaaggacgtgcaaacggtgatcagggccgtcaaggccggggactgg
tccgaggcggccgacggcaccgtcacggccgccggtatcgcgctgctgccggaggagtac
accacccgcctggtcgcggcggagccggagtcgacggccgcgctgcccggcggcgccggc
ctggtggtgctggactccacggtcaccgaggagctcgaggccgagggctgggcgaaggac
cggatccgcgagctgcaggacgcgcgccgcaacctgggcctggacgtctcggaccgcatc
tccgtcgtgttcgaggtgccggccgaccgcgccgactgggcactgcggcaccgcgagctc
atcgcctcggaggtgctcgccaccagcttcgaactcgcgcccgccggggacggggcgctc
gacctcggtgaaggggtgcgcgcggccatcgtcaaggcatga
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