Rhodococcus sp. DMU1: HFP48_15920
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Entry
HFP48_15920 CDS
T11419
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm00300
Lysine biosynthesis
rhdm00550
Peptidoglycan biosynthesis
rhdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HFP48_15920
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HFP48_15920
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhdm01011
]
HFP48_15920
Enzymes [BR:
rhdm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HFP48_15920
Peptidoglycan biosynthesis and degradation proteins [BR:
rhdm01011
]
Precursor biosynthesis
Amino acid ligase
HFP48_15920
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIX53310
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Position
complement(3470170..3471774)
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AA seq
534 aa
AA seq
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MRPEHPPVTQLRDLAAAVGATVGTVAPGATTSAAGLPVFVTGVDLRAQGVQPGDLFAALP
GARAHGAEYAAEALERGAVAVLTDAAGCEHLAAVVTRPVPVLVHPDPRSVLGVVSAAIYG
DPSQHMQVVGITGTSGKTTSAYLVEAGLAAAGRVTGLVGTIETRLAGRRVPSALTTPEAP
QLHALFAAMREQGIDTVVMEVSSHALSLGRVAGVRFAVGAFTNLSQDHLDFHRDLDDYFG
AKARLFAADSPVRARRAVVCIDDEWGVRMAGIARAAHPAEPEAVRTVATTGTADWTATAV
RTEPSGSQVFTLAGPDGTARRVAVRLPGHYNVANAALAVAVCAAVGVDVDAAAAGIADVD
VPGRVERVDRGQGFLAVVDYAHKPAALEAVIATLRGRAAGGRLAVVVGAGGDRDHGKRPL
MGDVGARGADLLVVTDDNPRTEDPAVIRAALLAGARAVPEQQRGEIREIGDRAAAVEAAV
RWARPGDIVLVAGKGHETGQEIHGVKHPFDDREVLAAAIDRFAGAGSEQYGGTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ctgagacccgagcatccaccggtgacgcagctccgcgacctcgctgccgccgtgggcgcc
accgtcggcaccgtcgcaccgggcgccacgacctccgccgcgggcctcccggtgttcgtg
accggcgtcgacctgcgggcccagggggtgcagcccggcgacctgttcgccgcactcccg
ggcgcccgcgcgcacggcgccgaatacgccgcggaggccctggaacggggtgctgtcgcc
gtcctcaccgacgccgccggatgcgagcacctcgccgccgtcgtcacccgccccgtgccg
gtgctggtccacccggatccgcggtcggtcctcggcgtcgtctccgccgccatctacggc
gacccgtcgcagcacatgcaggtcgtcggcatcaccggcacctccggcaagaccaccagc
gcctatctggtcgaggcggggctcgccgccgccgggcgggtcacgggcctggtcggcacc
atcgagacccgcctcgcgggccggcgggtccccagcgcgctcaccacccccgaggccccg
cagctgcacgccctgttcgcggccatgcgcgagcagggcatcgacaccgtggtgatggag
gtctcgagccacgccctgtccctggggcgggtcgccggggtccgcttcgcggtcggtgcc
ttcacgaacctgtcccaggaccacctcgacttccatcgcgacctcgacgactacttcggg
gcgaaggcccggctgttcgcggcggactcgcccgtgcgggcccgccgtgccgtcgtgtgc
atcgacgacgagtggggcgtgcggatggccgggatcgcccgcgccgcccaccctgcggag
cccgaggcggtgcgcaccgtcgccaccaccggaaccgccgactggacggcgacggcggtc
cgcaccgagccgtccggctcccaggtgttcaccctcgccgggcccgacggcaccgcacgg
cgcgtcgcggtgcgcctgcccggccactacaacgtcgccaacgccgccctcgccgtcgcg
gtgtgcgcggcggtcggggtcgacgtcgacgccgcggccgccggcatcgccgacgtcgac
gtacccggacgggtggagcgggtcgaccgcgggcagggtttcctcgccgtcgtcgactat
gcgcacaagccggccgcactcgaggccgtcatcgcgacgttgcgcggacgggcggccggc
ggccggctcgccgtcgtcgtcggtgcgggcggcgaccgcgaccacggcaagcgtccgctc
atgggcgacgtcggagcccgtggggcggacctgctcgtcgtcaccgacgacaacccccgc
accgaggatccggcggtcatccgcgccgcgctgctcgccggtgcccgcgccgtccccgaa
cagcagcggggggagatccgcgagatcggtgaccgggccgccgccgtcgaggcggccgtg
cgctgggcacgcccgggcgacatcgtcctcgtggcaggcaagggccacgagaccggccag
gagatccacggggtcaagcaccccttcgacgaccgcgaagtgctcgccgcggccatcgac
cggttcgccggcgcaggtagcgagcagtacggaggcaccgaatga
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