Rheinheimera sp. F8: ATY27_00785
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Entry
ATY27_00785 CDS
T09854
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhei03009
]
ATY27_00785 (rumB)
Enzymes [BR:
rhei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
ATY27_00785 (rumB)
Ribosome biogenesis [BR:
rhei03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ATY27_00785 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_15
TehB
Motif
Other DBs
NCBI-ProteinID:
ALZ74446
UniProt:
A0A0U4N988
LinkDB
All DBs
Position
complement(162285..163400)
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AA seq
371 aa
AA seq
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MYCEAFASGKCVSCPHIHQSYLQQLQRKQALLQQIFPGLPLELPCPSETAHFRNKAKMVV
MGTSQAPVLGILNGEDQVDLTACQLYPASFQQAFADLVDFIRLVGMEPYQLDSRRGELKF
ILLSYSELDGWLLRFVLRSQHHLAAIRKHLPALQQQWPALKVVTVNLQPQHKAILEGEQE
FVLSAEAMLRQQLNDVVLYLQPQSFFQTNSDVAAALYQTARDWSAALKPARIWDLFCGVG
GFALHLASPEVQVTGIEISAPAIDCAGRAARERGVSIDFRALDATAFADAAAQAPDLLVV
NPPRRGLGEALCQRIDALKPKALLYSSCNPITLAKDLQNLAAYQPQRAQLFDMFPHTEHA
EVLVLLQRHGD
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttgtactgcgaagcttttgccagtggcaagtgtgtgtcttgcccgcatatccatcaatcc
tatttgcagcagttgcagcgcaaacaggcgctactacagcagattttcccggggctgccg
ctagagctgccgtgcccaagcgagactgcgcatttccgcaataaagccaaaatggtggtg
atgggaaccagccaggcaccggtactcgggatcctcaatggggaagatcaggtcgacctg
actgcttgccaactttatccagctagttttcagcaagcttttgccgatctggttgatttt
atccgcttagtcggcatggaaccttatcagttggacagccggcgcggtgagctgaagttt
atcttgctcagttacagcgagttggatggttggttactgcggtttgtcttgcgctcacaa
catcatctggccgcgatccgcaagcatctgccggccctacagcagcaatggccagccctg
aaggttgtcacggtgaatctgcaaccgcagcacaaggcgatcctggaaggggagcaggaa
tttgtgctgagcgcagaagcgatgctgcgccagcaactgaatgacgtggtgctttatctg
cagccgcaaagctttttccagaccaatagtgatgttgccgctgcgttgtatcaaaccgcc
cgtgattggtctgctgcgctaaagcctgcccggatctgggatttgttttgtggcgtcggc
ggatttgcgttgcatttggcgtcacctgaagtgcaggtcaccggtatcgaaatctcggcc
cctgccattgactgtgccggccgggctgctcgtgagcgcggtgtcagtattgattttcgc
gccttggatgccacagcttttgctgatgcggccgcacaggcgcctgacttactggtcgtc
aatccgccacgccggggattgggggaggcgctatgccagcgcatagacgcgttaaaaccc
aaagcgctgttatattcgagctgtaatcccatcactttggcaaaggacctgcaaaatttg
gcggcctatcagccgcagcgggcgcaactctttgacatgtttccgcatacagaacacgcc
gaagtgctggtgctattgcagcgtcatggcgactga
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