Rheinheimera sp. F8: ATY27_06805
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Entry
ATY27_06805 CDS
T09854
Name
(GenBank) hemolysin D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rhei
Rheinheimera sp. F8
Pathway
rhei01501
beta-Lactam resistance
rhei01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ATY27_06805
01503 Cationic antimicrobial peptide (CAMP) resistance
ATY27_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhei03036
]
ATY27_06805
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhei02000
]
ATY27_06805
01504 Antimicrobial resistance genes [BR:
rhei01504
]
ATY27_06805
Chromosome and associated proteins [BR:
rhei03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
ATY27_06805
Transporters [BR:
rhei02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ATY27_06805
Antimicrobial resistance genes [BR:
rhei01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ATY27_06805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CusB
HH_AAEA_pHBA
HH_EMRA
YknX_C
HH_YBHG
HH_CyaD
BSH_CzcB
LptM_cons
Sos7
DUF7092
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
ALZ75493
LinkDB
All DBs
Position
complement(1506668..1507906)
Genome browser
AA seq
412 aa
AA seq
DB search
MQPIRRHQPLLQSTFTLLASALFLTACGQQAPATQGAGPAAPQVGVVTLQPQDVTLSREL
PGRVQAAQIAEIRPQVSGIVQARHFTEGSRVEAGATLYQIDPAPFTAALLSAQAAEARAK
ANIASTQAKAERYRELLKIKAVSRQDFDEAEAAFLQAKADLQSAKAQVSTAQINLNYSKV
LAPIAGQIGKSTVTTGALVSSGQNQALATITQLDPVFIDLTQSSSELLALKQALAKGAIG
QAASQTEVSLKLEDGSVYPHKGTLQFAEVTVNPDTGSVTLRASFPNPDQLLLPGMYVRAT
VQEGQQANAMLVPQRGVSRNAKGEATALVVSKDGKVEPRLLQTHRTVGSNWLVTAGLQAG
DQLIVEGLQKIRPGAVVQAVPATSTEVPSSAAPSPAVNASKGSAPAVPAAAR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctattcgtcgtcaccaacctctgctgcaaagcactttcaccctgcttgccagc
gccttgtttttaacagcctgtggccagcaagcccctgccacacaaggcgcaggccctgca
gctccgcaagtaggcgttgttaccctgcaaccgcaggatgtcaccttaagccgtgaatta
ccgggccgggtgcaggccgcgcagatcgctgagatccggccgcaagtcagtggcatcgta
caggcgcgccattttaccgaaggcagccgggttgaagccggcgccactttgtatcaaatc
gacccggcgccttttactgcggcgttgttaagcgcacaagcggccgaagccagggccaaa
gccaatatcgccagcacgcaggccaaagctgaacgttatcgcgaactgctgaaaatcaaa
gcggtcagccggcaggattttgatgaagccgaagcggcttttttacaggccaaagccgat
ttacaaagtgctaaagcccaggtcagcacggcacaaatcaatctgaattacagcaaagtg
ctggcccctattgctggtcagatcggtaaatcgacggtgaccaccggcgctttggtcagt
agcggccaaaaccaggcactggccacaatcacacaattagacccggtgtttatcgacctg
acgcagtccagcagtgaattgctggcgctgaaacaagcactggcgaagggcgctatcggc
caggcggccagccagaccgaagtcagcctgaaactggaagatggttccgtctatccgcac
aaaggtaccctgcaatttgccgaagtgacggtgaacccggataccggctctgtcactttg
cgcgccagcttcccgaatcctgaccagctgctgctgccgggcatgtatgtccgcgccacg
gtgcaggaaggtcagcaggcgaacgccatgctggtgccgcaacgcggcgtcagccgcaac
gccaaaggtgaagccaccgcgctggttgtcagcaaggacggcaaagtggagccgcgcctg
ctgcaaacccaccgcaccgtcggcagtaattggttagtcaccgccggtttacaggcgggc
gaccaactgattgttgaaggtctgcaaaaaatccgccccggcgctgtggtacaggcggta
ccggcgacctccactgaagtcccttcttctgcagcgccttcccctgcagtcaatgccagc
aaaggttctgccccggcagtaccggctgcggcccgttaa
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