Rodentibacter caecimuris: FEE42_05990
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Entry
FEE42_05990 CDS
T06473
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00270
Cysteine and methionine metabolism
rhey00450
Selenocompound metabolism
rhey00670
One carbon pool by folate
rhey01100
Metabolic pathways
rhey01110
Biosynthesis of secondary metabolites
rhey01230
Biosynthesis of amino acids
rhey04981
Folate transport and metabolism
Module
rhey_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
FEE42_05990 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FEE42_05990 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FEE42_05990 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FEE42_05990 (metH)
04980 Cobalamin transport and metabolism
FEE42_05990 (metH)
Enzymes [BR:
rhey01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
FEE42_05990 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
QIA76933
LinkDB
All DBs
Position
1185638..1189324
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AA seq
1228 aa
AA seq
DB search
MSEKTTALLKTALAQRILILDGAMGTMIQKYKLTEADFRGERFADSPIDLRGNNDLLTLT
QPLLISAIHEKYLEAGADIIETNTFSATTIAQADYDLQAVAYELNVAGARLARLAADKYS
TPEKPRFVAGILGPTNRTASISPDVNDPGFRNITFMQLVEAYAEAARGLIEGGADIIMIE
TIFDTLNAKAAAFAIDTVFEELGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHVKPI
SFGLNCALGPKELRQYMEQLPKICECYVSAHPNAGLPNAFGGYDLGAAEMAAQLKEWAQN
GFLNIVGGCCGTTPEHIKAFAEAMAGVKPRPLPAIKTAMRLSGLEPLTIDDESLFVNVGE
RNNVTGSAKFKRLIKEEKFAEAIEIAIDQVENGAQVIDVNMDEALLDSQKCMTRFLNIMA
TEPEAAKVPVMIDSSKWEVIEAGLQSIQGKGIVNSISLKEGEEKFIRQAKLVRRYGAAVV
VMAFDEVGQADTEERKVEICSRAYRILVDQVGFPPEDIIFDPNIFAIGTGIEEHNNYGVD
FINATGRIKQTLPHAKISGGVSNVSFSFRGNNPMREAIHAVFLYHAIKQGMDMGIVNAGQ
LAIYDDLDPELREVVEDAVLNRRSDATERLLDIAEKYRNQTACNEDNSVAEWRTWAVEER
LKHALVKGITNFIIEDTEEARQQFSSPLEVIEGPLMAGMDVVGDLFGDGKMFLPQVVKSA
RVMKQSVAYLEPFINATKQKGSSSGKVVIATVKGDVHDIGKNIVSVVLQCNNFEVIDLGV
MVPADKIIQTAIDEKADIIGLSGLITPSLDEMEYFLGEMNRLNLNIPVIIGGATTSKEHT
AIKLYPKYQHEVIYTTNASRAVTVCAALMNPDTKAELWARTKKEYEQIQQAFANKKAPRK
QLPIEEARANCFDGFSGKWADYQVPVPNQTGIIEYKNVPIATLRKFIDWSPFFRLWGLMG
GYPDAFDYPEGGEEARKVYNDAQKVLDELEQNRKLNPSGVMGIFPANGVGDDIEIYQNAD
RTLVAGKAYHLRQQSERGKNSKSPYNLCLSDFIADKASGKQDWFGMFAVCAGIEEHDLVE
GYKAAGDDYNAILLQAVGDRLAEAMAEYLHFELRTKVWGYSKETFENDRLIREDYIGIRP
APGYPSCPEHTEKQIIWDLLEVEQRIGMKLSESYAMWPAASVCGWYFTHPASNYFTLGRI
DEDQAVDYAKRKGWSEREMVKWLGVAMK
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaacaaccgcacttttaaaaaccgccctcgcccaacgcattttaatttta
gatggtgcaatgggaacgatgatccaaaaatataagctgaccgaagccgatttccgaggc
gagcgttttgccgatagtccgattgatttgcgtggcaataatgatttactgacccttacc
cagcctttactgatttccgccattcacgaaaaataccttgaggcaggcgcagatattatt
gagaccaatactttcagtgcgaccaccattgcccaagccgattacgatctgcaagcggtc
gcttatgagctgaatgttgcaggagcgagattggcgcgccttgccgctgataaatatagc
acccccgaaaagccgcgctttgtggcagggattttaggcccgaccaaccgcactgcctcg
atttctcccgatgtgaacgatcccggttttcgtaatattacctttatgcagcttgttgaa
gcctacgccgaggcagcacgagggctgatcgaaggtggagcggatattattatgatcgaa
accattttcgacactttgaatgcgaaagcggctgcctttgctattgacaccgtgtttgaa
gaactgggcgttgagttgccgattatgatttccggcacgatcaccgatgcgtcgggacga
acattgtcagggcagacgaccgaagcgttttataactccctccgccacgttaagccgatc
agttttggcttgaactgtgcgctcggcccgaaagagctgcgtcaatatatggagcaactg
ccgaaaatttgcgaatgttatgtgtcggcacacccgaacgctggcttgccgaatgccttt
ggcggttacgatttgggggcggctgaaatggcggcacaactcaaagagtgggcgcaaaac
ggctttctcaatattgtcggcggctgttgcggcacaacaccggagcatatcaaagccttt
gcagaggcaatggcgggggtaaaacctcgtccacttcccgccattaaaaccgcaatgcgt
ttgtcgggcttagaaccgctgacgattgatgatgaaagtctctttgtgaatgtcggcgag
cggaacaatgttaccggttcggcaaaattcaaacgcttgattaaagaagaaaaatttgca
gaagcgattgaaattgcgatcgatcaagtggaaaacggggcgcaggtgattgacgtgaat
atggacgaggcattgctcgacagccaaaaatgtatgacccgttttctcaacattatggcg
accgaaccggaagcggcaaaagtgccggtgatgatcgactcgtcaaaatgggaagtgatt
gaagcaggcttgcagtctattcaaggcaaagggattgtgaactccatctcgctcaaagag
ggcgaggaaaaatttatccgacaagccaaattagtccgccgttacggtgcggctgtggtg
gtgatggcgtttgatgaggtcgggcaggcggatacggaagaacgcaaggtcgaaatttgt
agccgtgcttatcggatcttggtcgatcaagtcggttttccgccggaagatattattttc
gacccgaatatttttgcgattggcacggggattgaggaacacaacaactacggcgtggat
ttcatcaatgcgacggggcggattaagcaaaccttgccgcacgccaagatttccggcggt
gtgtcgaacgtatcgttctcgtttcggggcaataatccgatgcgggaagccattcacgcc
gtgttcctctatcacgccattaagcagggaatggatatggggattgtcaatgcggggcag
ttggcgatttatgatgatcttgatccggaactgcgtgaagtggtggaagatgcggtgtta
aaccgccgctctgatgcaaccgaacgtttgttggatattgcagaaaaataccgcaatcag
accgcttgcaacgaggataacagcgtggcggaatggcggacgtgggcggtggaagaacgc
ttaaaacacgccttggtgaaagggatcaccaattttattattgaagataccgaagaagcc
cgccagcagttcagctcaccactggaggtgattgaaggaccgctaatggctggaatggac
gtggtgggcgatctgttcggggacggcaaaatgttcctgccgcaagtggtgaaatccgct
cgggtaatgaagcagtcggtcgcctatttagagccgtttatcaatgcgaccaaacaaaaa
ggctcaagcagcggcaaagtagtgattgcgaccgtgaaaggtgatgttcacgacatcggc
aaaaatatcgtgagcgtggtgttgcaatgtaacaattttgaggtaattgatcttggcgtg
atggtaccggcggataaaatcattcaaacggcgattgacgaaaaagcggatattatcggc
ttgagcggcttaattaccccgtcccttgatgaaatggagtattttttgggcgaaatgaac
cgtcttaacctcaatattccagtgattatcggcggggcgaccacctccaaagaacatacg
gcaattaaactttacccgaaatatcaacacgaagtgatttacaccaccaatgcctcccgt
gccgtaaccgtgtgtgctgccttgatgaaccctgacaccaaagcggaattgtgggcgaga
acgaaaaaagagtacgagcaaattcaacaggcgtttgccaataaaaaagcccctcgcaag
cagttaccgattgaggaggcacgggcaaactgttttgacgggttcagtggcaaatgggcg
gattatcaagtccccgtaccaaatcaaacaggcattatcgaatataaaaatgtgccgatt
gccacgctgcgaaaatttatcgactggtcgccattcttccgcttatggggcttgatgggc
ggttatcccgatgcctttgattaccctgaaggcggcgaagaagcccgcaaagtctataat
gatgcgcagaaagtgctggacgaacttgaacaaaaccgcaaactcaacccaagcggtgta
atggggattttccctgctaacggcgtaggcgatgatattgaaatctaccaaaatgctgac
cgcactttagtcgcaggcaaagcctaccatctccgccaacaaagcgaacgaggcaaaaac
agcaaaagcccgtacaacctctgtttgagcgattttatcgccgacaaagcgagtggaaaa
caagattggttcggaatgttcgccgtctgcgcaggcattgaagaacacgatttagtcgaa
ggttacaaagcggcaggggacgactataacgctattctcctgcaagcggtcggcgaccgc
ctcgccgaagcaatggcggaatatctgcattttgagctacgcaccaaagtgtggggatat
agcaaagaaacctttgaaaacgaccgcttgatccgagaagattacatcggcatccgcccc
gcccccggatacccaagctgcccggaacacactgaaaaacagattatctgggatttgctt
gaagtggaacaacgcatcggaatgaaactctccgaaagctacgcaatgtggcccgctgcc
tcggtttgcggctggtatttcacccaccctgcttccaattacttcacattaggcagaatt
gatgaagatcaggcagtggattatgccaaacgcaaagggtggagtgaaagagaaatggtg
aagtggttaggggtggcgatgaagtag
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