Rodentibacter caecimuris: FEE42_11765
Help
Entry
FEE42_11765 CDS
T06473
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00540
Lipopolysaccharide biosynthesis
rhey01100
Metabolic pathways
Module
rhey_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FEE42_11765 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
FEE42_11765 (lpxC)
Enzymes [BR:
rhey01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
FEE42_11765 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
Lipid A
FEE42_11765 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Omp85
Motif
Other DBs
NCBI-ProteinID:
QIA78203
LinkDB
All DBs
Position
2405606..2406523
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKQSVKVTGIGLHSGKKVTLTLRPAMPNTGVIYCRTDLNPPVTFPANADSVRDT
MLCTALVNEQGVRVSTVEHLNAALAGLGIDNIIIEVDAPEIPIMDGSSSPFIYLLLDAGI
EEQNAAKKFIRIKQKVRVEDGDKWAEFTPYNGFRLDFTIDFEHPAIGKNVRNYVMDFSAQ
AFVHQISRARTFGFMKDIEYLQSQGLALGGSLDNAIVLDDYRILNEEGLRFKDELVRHKM
LDAIGDLYMVGYNIIGDFKAYKSGHGLNNKLLRAVIANQEAWEFVTFEDKEQAPHGYVTP
AQVLI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaagaacattaaaacaaagtgttaaagtaaccggtatcggtttgcatagc
ggcaaaaaggtgaccttaacattacgtccggcaatgccaaataccggtgtgatttactgt
cgtaccgatttaaatccgccggtaacattcccggcgaatgcggattctgtgagagatacg
atgctttgtaccgcacttgtcaatgaacaaggcgttcgtgtttcaactgttgaacattta
aacgcggcattagcgggtctcggtattgataatattattattgaagtagatgcacctgaa
attccgattatggatggtagttcaagtccgtttatttacttgttgttagatgccggtatt
gaagagcaaaacgcagcgaagaaatttattcgtatcaaacaaaaagtgcgggtagaagat
ggagataaatgggcggagtttactccttacaatggtttccgtttagatttcactattgat
tttgaacatcctgccattggtaaaaatgtgcgtaactatgtgatggatttttcagcccaa
gcatttgttcaccagatcagtcgcgcaagaacctttggttttatgaaagatatagaatat
cttcaatcccaaggtctagcgcttggcggtagtttagacaatgcgattgtattggatgat
taccgtattttgaatgaagaaggattgcgttttaaagatgagttggttcgtcataaaatg
ttggatgccattggggatctttatatggtgggttacaacattatcggcgatttcaaagcc
tataaatcgggtcatggtctaaataacaagttgcttcgggcggttattgcaaatcaggaa
gcgtgggaatttgttacctttgaagataaggaacaggcgccacacgggtatgttacacca
gcccaagtgctgatttaa
DBGET
integrated database retrieval system
