Rhodoferax sediminis CHu59-6-5: EUB48_08945
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Entry
EUB48_08945 CDS
T06165
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EUB48_08945 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhf03400
]
EUB48_08945 (nth)
Enzymes [BR:
rhf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EUB48_08945 (nth)
DNA repair and recombination proteins [BR:
rhf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EUB48_08945 (nth)
Prokaryotic type
EUB48_08945 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
QDL37384
UniProt:
A0A515DAF5
LinkDB
All DBs
Position
complement(1861669..1862307)
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AA seq
212 aa
AA seq
DB search
MKKENIEPFFAALKAANPQPNTELEYTSVFELLTAVLLSAQATDVGVNKATRRLFAVANT
PQKILDLGQEGLESYIKTIGLFRSKAKHLMETCRILVAQHGGVVPRTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVANRTGLAPGKTPYEVEMQLMKRVPPEYLVDAHHWLI
LLGRYVCVARKPQCWRCGVAQFCDYAPKTPAP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaaaacatcgagccgttttttgccgcgttgaaggcggccaatccccagccc
aataccgaattggagtatacgagcgtgttcgaactgctcactgccgtgctgctgtcggcg
caggccaccgacgtgggggtgaacaaggcgacgcgccgcctgtttgcggtggccaacacg
ccgcagaaaatcctggacctcgggcaagagggcctggagagctacatcaagaccatcggc
ctgttccgcagcaaggccaaacatttgatggagacctgccgcatcctcgtggcgcagcac
ggcggcgtggtgccgcgcacgcgcgaggcgctggaggccctgcccggcgtgggccgcaag
acggccaacgtggtgctgaacgtggcgtttggcgagcccacgatggcggtggacacgcac
atctttcgcgtcgcaaaccgcaccggcctggcgccgggcaagacgccctacgaggtggag
atgcaactcatgaagcgcgtgccgcccgaatatctggtggacgcgcaccactggctgatc
ttgcttggccgctatgtgtgcgtggcgcgcaagccgcaatgctggcgctgcggcgtggcg
cagttttgcgactatgcacccaagacaccggcgccttga
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