Rhodoferax sediminis Gr-4: EXZ61_04635
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Entry
EXZ61_04635 CDS
T06176
Symbol
murF
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF
KO
K15792
MurE/MurF fusion protein [EC:
6.3.2.13
6.3.2.10
]
Organism
rhg
Rhodoferax sediminis Gr-4
Pathway
rhg00300
Lysine biosynthesis
rhg00550
Peptidoglycan biosynthesis
rhg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EXZ61_04635 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EXZ61_04635 (murF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhg01011
]
EXZ61_04635 (murF)
Enzymes [BR:
rhg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
EXZ61_04635 (murF)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EXZ61_04635 (murF)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhg01011
]
Precursor biosynthesis
Amino acid ligase
EXZ61_04635 (murF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QDL53519
UniProt:
A0A515ELL5
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All DBs
Position
980007..982949
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AA seq
980 aa
AA seq
DB search
MPLLSTPLAAAQWLRTLGARTLTSDSRKVVPGAGFIAWPGAVSDGRQYVRQALELGAVAC
VVESAGAHQFDLAIDGVATLDNLKSHTGRLAAEFYGNPSAELAVIAVTGTNGKTSSAWWL
AQALSALQGEHATPCGMIGTLGVGRPPAIGDEPMVGADSVLSTGLTTPDPVVLQHTLREF
ASNGLRACAIEASSIGIEEQRLAGCTVRVAVFTNFTQDHLDYHASMEAYWTAKAKLFGWP
GLESAVINVDDAKGVELVARLAGSGLDVWSVSTRKPARLRAQNIQYGHEGLSFDVVEGVL
SVHVATHLIGDYNVSNLLGVIGAMRCLGVPLQQATEVCSGLRPVPGRMECLGSAAQPMVA
VDYAHTPDALGQALAALRPLAQARGGRLWCVFGCGGDRDASKRPLMGAIAAQQADQVVVT
SDNPRSERPESIIAQILVGVPHNPLVSVQTDRALAIAQTIAQASAQDVILVAGKGHEDYQ
DIAHVKHPFSDREHAQSALIARERGMASPALDPLMTLAFAAELLPGSVLVGDPETVVYRV
HTDTRSIAVGDLFVALQGERFDANAFLQQAKDQGAAAVICQAGMAASSYPQGLARLEVAD
TKLALSELATKWRARFNFPVIAVTGSNGKTTVTQMVAAILEAHSPQGGSLATLGNYNNDI
GVPLTLLRLRANHSIAVVELGMNHPGEIAVLAAMARPTVALVNNAQREHLEFMHSVQAVA
QENGQVLAALPVDGVAIFPSDDAYAAVWHSLAAPRQTLTFAAEGPSSSASLCVQSAHWQD
GAWEVHASGFGVDLRFRLAIAGRHNVKNALAAAACALAAGVRKEAVVAGLQAFVPVKGRS
RALSVRVSGRLVTLVDDSYNANPDSVRAAIDVLAELPGPRLLVLGDMGEVGDNGPAFHAE
AGQYAAQAGIEQVMTLGELSQHLAHTMPSAQHFDSMDALISGVLAALPSLGSILIKGSRF
MRMERVVDAARGQVASEGGH
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgctgtccactccacttgcagcagctcagtggttgcgtaccttgggagcgcgc
acgctcacttctgacagtcgcaaagtagtgccaggagcgggcttcattgcgtggcctggt
gccgtgtctgatggacgccagtatgtgcggcaggccttggaactaggcgcagttgcatgt
gtggtggagtctgcgggtgctcatcagtttgacctcgcaatagacggcgtagccacactg
gacaacctaaagtcacacacgggaagacttgccgctgagttctatggcaacccatctgcc
gaactcgcagtcattgctgtcactggaaccaacggtaaaacctccagcgcatggtggctt
gcccaggcgttgtctgcattgcaaggggagcatgccacgccttgcggaatgattggtacc
ttgggtgtaggccgtcccccagctattggtgacgagcccatggtgggggctgatagcgtg
ctcagcaccggtttgaccactccagaccctgtcgtgttgcaacacactttgcgcgagttt
gcgagcaatggcttacgagcttgtgcgattgaagcctcgtccatcggaattgaagaacaa
cgattggctggatgcacggttcgcgtggctgtctttacgaatttcacacaagaccatctg
gactaccacgcaagcatggaagcgtattggactgccaaagcgaagctattcgggtggcca
ggtttggaaagtgcggtcatcaatgtagatgatgccaaaggcgtcgagttggtagctcgc
ttggcgggcagtggcttggatgtgtggtcggtctccacaagaaaacccgcccgtctaagg
gcacaaaacatccagtacgggcatgagggattgagcttcgatgtggtcgaaggcgtgctt
tccgtgcatgtcgcgacgcatttgattggggactacaacgtctctaatctgctaggtgtg
atcggtgcaatgcgctgcttgggggtacctttgcagcaagcgacagaggtgtgcagtgga
ctccgacctgtgcctggccgcatggagtgcttgggttcagccgcacagcccatggtcgcc
gtagactatgcccataccccggacgcgttaggtcaagcgttagccgctttgcggcctttg
gcgcaggcgcgaggcgggcgtctatggtgtgtatttggctgcggtggcgatcgcgatgcg
tcaaaaagaccccttatgggggcgattgcggcccaacaggcggaccaagtggtggtcacc
agcgacaacccacgtagcgagcggcctgaatccatcattgcccagatccttgtcggtgtg
ccgcacaaccctttggtgagtgtgcaaactgaccgtgctcttgcaattgctcaaaccatt
gcgcaagcatccgcacaagacgtcattttggttgcaggtaagggccacgaggactaccag
gatattgcacacgttaagcatccattttcagaccgtgagcatgcgcagtccgcactcatc
gcacgcgaaagaggtatggcgagcccagcgctagacccgctcatgacgttggcgttcgct
gccgagttgttgcccggcagcgtactcgtgggagaccccgaaacggtggtctaccgtgtc
cacacggacacccgtagcattgcagtaggtgatctctttgttgcactccagggtgagcgc
tttgacgccaatgccttcttgcaacaagcaaaagaccaaggcgcagcagccgtcatctgc
caggctggcatggccgctagttcgtatccccaaggcttggcacgtctggaagtcgccgac
accaaactggcgttgtctgagttggcaaccaagtggcgtgcacgcttcaactttcctgtc
attgcagttacgggcagtaatggcaaaaccacggtcacgcaaatggtggccgctattttg
gaggcgcacagcccccaaggcggctcattggctacgctcgggaattacaacaatgacatc
ggcgtgccgcttacgttgctgcgactgcgtgccaaccacagcatagcggtggtggaactg
ggcatgaaccaccccggcgaaatagcggtgctcgcggctatggctaggcccacagtggct
ttggtcaacaacgcacaacgcgagcaccttgagttcatgcacagcgtgcaggctgtcgcg
caagagaatggacaagttttagccgcattaccagttgatggggttgcaattttccctagc
gatgacgcgtatgcagcggtctggcacagcttggcggcaccgcgccaaactctcacgttt
gccgcggaggggccatcctcatcagcaagcctgtgtgtgcaaagcgcccactggcaagat
ggcgcttgggaagtccatgcgtccggtttcggcgtagacctgcgctttaggctcgcaatc
gccggccgtcataacgtcaaaaacgctttggcagcagctgcgtgtgctctggccgctggc
gtgcgcaaagaagctgtcgtggctgggctccaagcctttgttcccgtcaagggacgctca
cgggctttgtctgttcgggtgtcagggcggctggtcaccttggtggacgatagctacaac
gccaatcctgattcggtgcgcgcggccatcgatgtacttgctgagttgcccggcccgcgt
ttgctggtgttgggtgatatgggtgaggtgggcgataacggccccgcctttcatgcggaa
gcgggccagtacgccgcgcaggcgggtattgagcaagtgatgaccttgggcgagctgtct
caacaccttgcacacacgatgccgagcgcgcagcacttcgactccatggatgcattgatt
agcggcgtacttgctgcactccctagcttgggcagcatattgatcaagggttcacgcttt
atgcgcatggagcgggtcgtagatgccgcgcgtggacaggttgccagcgaaggagggcat
tga
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