Rhodoferax aquaticus: EXZ61_08125
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Entry
EXZ61_08125 CDS
T06176
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhg
Rhodoferax aquaticus
Pathway
rhg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXZ61_08125 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhg03400
]
EXZ61_08125 (nth)
Enzymes [BR:
rhg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EXZ61_08125 (nth)
DNA repair and recombination proteins [BR:
rhg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXZ61_08125 (nth)
Prokaryotic type
EXZ61_08125 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDL54135
UniProt:
A0A515EN99
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All DBs
Position
complement(1739011..1739652)
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AA seq
213 aa
AA seq
DB search
MTPAAIETFFATLQAANPHPQTELEFSSVFELLAAVLLSAQATDVGVNKATRRLFHTANT
PQKMMALGLPALEDSIKTIGLYRSKAAHLMKTCEILVEQHGGVVPRTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHLFRLGNRTGLAPGKTPLEVELKLLKRIPQRYMVDAHHWLI
LHGRYICQARKPLCWQCAVHHVCDYSPKTSAAN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
gtgacccctgctgccatcgaaacgtttttcgcaacgctacaggctgcgaatccccaccca
caaacggagctggagttcagctccgtttttgaattgttggcggctgttttgctatcggca
caagcgacagatgttggcgtgaacaaagccacacggcgcctgtttcataccgccaacacg
cctcagaaaatgatggcactcgggctgcctgcgttagaggattcgatcaagaccattggc
ttgtaccgcagcaaagcggcacacctgatgaagacgtgtgagatcttggtagaacagcac
ggtggcgtggtcccccgcacccgcgaggcgcttgaagcattgcccggagtaggacgcaaa
actgccaatgtggtgctcaacgtggcctttggcgaacccaccatggcggtggatacacac
ctgtttcgcttggggaaccgcacaggcttagccccaggcaaaacaccgctggaagtcgag
ctgaagctgcttaaacgcatcccccagcgctacatggtcgatgcgcaccattggttaatt
ctgcatggacgctacatttgccaagcccgcaagcccttgtgctggcaatgcgcagtgcac
catgtatgtgactattcgcctaagacttccgcagcaaattag
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