Rheinheimera sp. D18: E0Z06_06285
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Entry
E0Z06_06285 CDS
T05923
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E0Z06_06285 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_06285 (nth)
Enzymes [BR:
rhh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E0Z06_06285 (nth)
DNA repair and recombination proteins [BR:
rhh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E0Z06_06285 (nth)
Prokaryotic type
E0Z06_06285 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
YlbE
Motif
Other DBs
NCBI-ProteinID:
QBL09150
UniProt:
A0A4P6VSP0
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All DBs
Position
complement(1323895..1324554)
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AA seq
219 aa
AA seq
DB search
MNKQKRIEILSRLRAANPNPTTELEYSSPFELLIAVLLSAQATDVGVNKATKHLFAVART
PQAMLDLGVDGVKHYIKTIGLFNTKAENTIKTCRMLVDLHQGQVPENRAALEALPGVGRK
TANVVLNTAFGWLKDNEGKYFIAVDTHIQRVANRTGYAKGKTVEETEQSIIKNTPNKTEF
MYNLHHWLILHGRYTCVARKPRCGSCIIEDLCEFKDKTD
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaaaaacgtattgaaatactaagccgcctgcgcgcggctaatccaaacccg
actaccgaacttgaatacagctcaccgtttgaactccttattgcagtgctattgtcagca
caagccaccgatgttggcgtaaacaaagccactaagcatctattcgctgtcgcccgcaca
ccgcaagcgatgttagatttaggtgtagacggcgttaaacactatataaaaaccattggc
ttatttaataccaaagctgaaaacaccataaaaacctgccgcatgctggttgatctacac
caaggccaagttcctgaaaaccgagcagccctagaagcgctacccggtgttggccgaaaa
accgcaaacgtggtgcttaatactgcatttggttggctaaaagataatgaaggtaaatac
tttatcgcggttgatacccacatccagcgcgtcgccaaccgcacgggctatgccaaaggc
aaaacagttgaagaaaccgagcaaagcatcattaaaaataccccgaacaaaaccgagttt
atgtacaacttgcatcattggttaattttgcatggccgctacacttgcgtcgcccgcaaa
ccgcgttgcggcagttgtatcatcgaagatctgtgcgagtttaaagacaaaactgactag
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