Sinorhizobium fredii NGR234: NGR_c26230
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Entry
NGR_c26230 CDS
T00888
Name
(GenBank) putative citrate lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00630
Glyoxylate and dicarboxylate metabolism
rhi00660
C5-Branched dibasic acid metabolism
rhi00680
Methane metabolism
rhi00720
Other carbon fixation pathways
rhi01100
Metabolic pathways
rhi01120
Microbial metabolism in diverse environments
rhi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NGR_c26230
00660 C5-Branched dibasic acid metabolism
NGR_c26230
09102 Energy metabolism
00720 Other carbon fixation pathways
NGR_c26230
00680 Methane metabolism
NGR_c26230
Enzymes [BR:
rhi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
NGR_c26230
4.1.3.25 (S)-citramalyl-CoA lyase
NGR_c26230
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Gene cluster
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Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
ACP26380
UniProt:
C3MH94
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Position
2721519..2722460
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AA seq
313 aa
AA seq
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MSHTINHLRRLRLQRSELAVPGSNPEMIEKAASSDADYIFLDIEDAVAPPDKERARANIV
QALNQIDWRDRGKTISVRINGLDTHYMYRDVVDLMEQAGDRIDTLLVPKVGVPADLYMVE
AMVNQIEIAKGYKTRVGLEALIETALGMANVETIAAYGGRLEALHFGVADYAASLKARTV
NIGGLNPDYPGDQWHFGLSRMTVACRAYGLRAIDGPFGDFSDPEGYKAAARRAAALGIEG
KWAIHPSQIALANEIFSPPEKEVDRARRIIEALKVAESQGKGAASLDGKMIDAASERMAR
NVLATHEAITAGR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagccatacgatcaaccatctccgccggcttcgcctgcagcgcagcgaactcgccgta
ccgggctcgaaccccgagatgatcgagaaggccgccagttcggatgccgactacatcttc
ctcgacatcgaggatgcggtggcgccgccggacaaggagcgggcccgcgccaatatcgtg
caggcgctcaaccagatcgactggcgcgaccgcggcaagacgatctcggtccgcatcaac
gggctggacacccactacatgtatcgcgacgtcgtcgacctcatggagcaggccggcgac
cggatcgacacgctgctcgtgccgaaagtcggcgtgccggccgacctctacatggtcgaa
gccatggtcaaccagatcgagatcgccaagggctacaagacccgcgtcggtctcgaggcg
ctgatcgagacggccctcggcatggccaatgtcgagacgatcgccgcctatggcggacgc
ctcgaagcgctgcatttcggcgtcgccgactatgccgcgagcctgaaggcccgcaccgtc
aatatcggcggcctcaaccccgactatccgggcgaccagtggcatttcggcctgtcgcgc
atgaccgtcgcctgccgcgcctacggcctgcgcgccatcgatgggccgttcggcgatttc
tccgatccggaaggttacaaagctgcagcacgccgcgccgccgccctcggtatcgaggga
aaatgggcaatccatccgagccagatcgcgctcgcaaatgaaatcttctcgccgccggaa
aaggaggtcgaccgcgcccgccgcattatcgaggcgctgaaggtggccgagagccagggc
aagggtgccgcctcgctcgacggcaagatgatcgacgccgcctccgagcgcatggcgcgc
aatgtgctcgccacccatgaagccatcaccgccggccgctga
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