Sinorhizobium fredii NGR234: NGR_c28560
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Entry
NGR_c28560 CDS
T00888
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi01501
beta-Lactam resistance
rhi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NGR_c28560
01503 Cationic antimicrobial peptide (CAMP) resistance
NGR_c28560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhi03036
]
NGR_c28560
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c28560
01504 Antimicrobial resistance genes [BR:
rhi01504
]
NGR_c28560
Chromosome and associated proteins [BR:
rhi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NGR_c28560
Transporters [BR:
rhi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NGR_c28560
Antimicrobial resistance genes [BR:
rhi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NGR_c28560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Rab5-bind
Motif
Other DBs
NCBI-ProteinID:
ACP26602
UniProt:
C3MIN9
LinkDB
All DBs
Position
2977355..2978530
Genome browser
AA seq
391 aa
AA seq
DB search
MFRTVFRSVEFVLGLGSLLFCATADGIAQNAPVVGVMTVQVEDVSPGYEFVGRVEALNAV
DIRARIEGFLENRLFAEGQNVDKDQDLFTLERTAYELALQDAQAVLVAAQTTLDNAERQF
QRNQALRSTVSQAVLEESQAARDTARAGVLSAQARVEQAEINLGYTHIKAPIGGRIGRAA
FSVGSLVSPSSEPLARVVQADPIRVVFSVSDRTILDLRTAAGGAGKDELAKRYTLKLRLS
NGEPYQQAGKVEFFENEVDVQTGTLPIRALFANAQSLLMPGQFVTVIVEPADRQQRPVVP
IGAVEQDRDGRFVLVVDGESRAAVQRIRVSTQLGQNWVVEEGLKGGEQLIVQGLQRVSPG
AAVEAQSVSAGDAATNVMAPTSGSAPGSSSQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaacggtgtttcggtctgtggagttcgttctaggcctgggcagccttctgttc
tgcgcgaccgcagacggcatcgcccagaatgcgcccgtcgtgggcgtcatgaccgttcag
gtcgaagacgtgtcgcccggctacgagttcgttggccgggtcgaggccctcaacgcagtc
gacatccgagccaggatcgagggcttcctggagaaccggctcttcgccgaaggccaaaac
gtcgacaaggatcaggacctcttcaccctcgagcgcacggcctacgagctcgcgctccag
gatgcacaggcggtcctcgtcgccgcccagacgacgctcgataatgccgagcgccagttc
cagcgaaaccaggcgctccggagcaccgtctcgcaggccgtgcttgaggagagccaggcg
gcgcgcgacactgcccgggcaggcgtcctatcagcacaggccagggtcgaacaggcggag
atcaatctcggctacacgcacataaaggccccgatcggtggccggatcggccgcgccgcc
ttctccgtgggaagtcttgtcagcccttcgtcggagccgttggcccgggtggttcaggcg
gatcccatccgcgtggtcttctcggtcagcgatcgtactatcctcgacttgcggactgcc
gccggaggggcgggcaaggacgaattggcaaagcgctataccctcaagctgcgtctctcg
aatggcgagccctaccagcaggcagggaaggtcgaattcttcgaaaatgaggtcgacgtg
cagaccgggacgctgccgatccgagcgcttttcgccaatgcgcaatcgctcctcatgccg
gggcagttcgtgacggtgatcgtcgagcccgcggatcggcagcagcgtccggttgtaccc
atcggggcggttgagcaggaccgcgacggccgcttcgtgctcgtcgtcgacggggagagc
cgcgccgccgtgcagcgcattcgcgtctccacgcagctcggacaaaactgggtcgtcgaa
gaggggctgaagggcggggagcagctcatcgtccagggcctccagcgcgtctccccgggt
gccgccgtcgaggcgcagagcgtatcagccggcgacgccgcgacgaatgtcatggcgccg
acatccggttcggcgccgggatcgtcaagccaatga
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