Sinorhizobium fredii NGR234: NGR_c35220
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Entry
NGR_c35220 CDS
T00888
Name
(GenBank) putative efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi01501
beta-Lactam resistance
rhi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NGR_c35220
01503 Cationic antimicrobial peptide (CAMP) resistance
NGR_c35220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhi03036
]
NGR_c35220
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c35220
01504 Antimicrobial resistance genes [BR:
rhi01504
]
NGR_c35220
Chromosome and associated proteins [BR:
rhi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NGR_c35220
Transporters [BR:
rhi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NGR_c35220
Antimicrobial resistance genes [BR:
rhi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NGR_c35220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
YknX_C
HH_MFP_RND
CzcB_C
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
Collagen_mid
HH_CzcB
CoV_NSP9
Motif
Other DBs
NCBI-ProteinID:
ACP27246
UniProt:
C3MC21
LinkDB
All DBs
Position
complement(3740002..3741204)
Genome browser
AA seq
400 aa
AA seq
DB search
MHMTRPILAASLATVLILAGCQKNEEQAAAPAFPPAAVAVYTTAAEPLPITNELPGRITP
TRIAEVRPRISGIVVERVFEQGTMVKEGDVLYRIDPAPFQVKVDSAAATLKRAIAVRDQA
KQTADRQSRLKEAQVAAVQQYDDAIATLAQAEADIGIAEAGLAEAKLNLQYADVTAPISG
RIGRALITEGALVSATDTQNLATIQQLDPVYADFTQSATDLIRLRKALQDGQLISGKNEA
EVQLILDDGTPYGLKGRLLFSEAAVDATTGQVTLRGEFPNPNNDLLPGMYVRVQIQQGLE
KDAITVPQQAVQRNNAGQSQVYVVTADKKVEFRNVTLGRTVGERWQVTAGLKAGEKVIVE
GFQKIGPGAPVEPTDWKPGAKPDTEQQSAAAGDKSATAVK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgacccgaccgatactggccgcctcgctggcaaccgtgctcattctcgccggc
tgccagaagaacgaagagcaggccgccgcgccggccttccctccggcggcggtcgccgtc
tacacgacggcggcggaacccttgccgatcaccaacgagcttcccggccgcatcacgccg
acgcggatcgccgaggttcggccgcgcatttccggcatcgtggtggagcgggtgttcgag
cagggcacgatggtcaaggaaggcgacgtgctttaccggatcgacccggcgccgttccag
gtcaaggtcgacagcgccgcggcgacgctgaagcgggcaattgccgtgcgcgatcaggcc
aagcagaccgccgaccgacagtcgcggctgaaggaagcgcaggtcgccgccgttcagcag
tatgacgacgcgattgcgacgctcgcccaggccgaggccgatatcggcattgccgaggcc
ggtctcgccgaggcgaagctcaatcttcaatatgccgatgtgactgcgccgatcagcggc
cgcatcggccgggcgctgatcaccgagggcgcgctcgtcagcgcgaccgacacacagaac
cttgcaaccatccagcagctcgaccccgtctatgccgacttcacccagtcggcgaccgac
ctgatccggctgcgcaaggcgctgcaggacggccagctgatcagcggcaagaacgaagca
gaggtgcagctcatcctcgatgacggcacgccctatggcctgaagggccggctgctcttc
tccgaggcggccgtcgacgcgaccaccggccaggtgacgctgcgcggcgagtttcccaac
cccaacaacgatctgctgccgggcatgtatgtgcgcgtgcagatccagcaggggctggag
aaggacgccatcaccgttccgcagcaggccgtgcagcgcaacaacgccggtcagtcacag
gtctatgtcgtcaccgccgacaagaaggtcgagttccgcaacgtcacgctcggccggact
gtcggcgagcggtggcaggtgacggccggtctcaaggccggcgaaaaggtcatcgtcgag
ggcttccagaagatcggtcccggtgccccggtcgaacccaccgattggaagccgggcgcc
aagcccgacaccgaacaacagagtgccgcggccggcgacaagtccgctaccgcagtgaag
tga
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