Rhinolophus hipposideros (lesser horseshoe bat): 308488097
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Entry
308488097 CDS
T12007
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8 isoform 2
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii04140
Autophagy - animal
rhii05014
Amyotrophic lateral sclerosis
rhii05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
308488097 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308488097 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
308488097 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rhii04131
]
308488097 (SMCR8)
Membrane trafficking [BR:
rhii04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
308488097 (SMCR8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
MAL13P1_304_C
BCD_RFX
Motif
Other DBs
NCBI-GeneID:
308488097
NCBI-ProteinID:
XP_080883499
LinkDB
All DBs
Position
20:1618661..1632786
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AA seq
982 aa
AA seq
DB search
MISAPDVVAFTKEDGYEEEPYEEPALPEEYSVPLFPFASRGANPWSKLSAAKFSRDFILI
SEFSEQVGPQPLLTVPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLHFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKSFAGELEKKLKDLDYTRTVLHTETEIQKNANDRGFYSSQAIEKANELASVE
KSIIEHRDLLKQIRSYPHRKVKGSDLCSGAVGHTQDQPDQAATTSNPDERADTDLYTSRP
AYTPKLIKAKSAKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHTFRGDLCYLLTSQIDKA
LLKQQHITNFLFEDFVEVDERVVEKQASTPPQPSQDRPPSGSLGECPIPQVLISVGSYKS
SVESVLIKMEQELGEEEYREVEGTGLSSFDPQENLDYLDMDMKGSVSSGESIEVLGTEKP
TCVLATSDSQASLTVSLSPQVVRSKAVSHRTVSEDSIEVLSTCPSEALIPEDFKASYPSA
INEEESYADDSEGAIHFQVGVSLPELGEAEEGSLENATSQADSCCIGKESDSLQGPLSTP
APTLSDKNGVVSTPPQRYRQKDQGFHVDFTVENASPSSRDNSSEGCPAYELDPSHLLASR
DVSKTSLDNYSDTTSYVSSVASSSWDRTPSSAHPAGASSERHKKRAGQNALKFIRQYPFA
HPAIYSLLSGRTLVVLGEDEAIVRKLVTALSIFIPNYSRYAKPVKHWVSSPLHIMDFQKW
KLIGLQRSASPASAGTLHALSRYSRYASVLDLDNKTLRCPLYRGTLVPRLADHRTQIKRG
STYYLHVQSMLAQLCSKAFLYTFCHHLHLPAHDQDTQELLASRQASFLKLNLGLVNEDVK
VVQYLAELLKLHYMQESPGTSHPMLRAFARKLSLHDGPWSRRQARQVLPEDGPAAPTTER
ANGAAPWSCSSRRRGILKWYLD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgccccggacgtggtggccttcaccaaagaggacgggtacgaggaggagccc
tacgaggagccggccctgcccgaggagtactcggtgccgctcttccccttcgcgagccga
ggggctaacccgtggtccaaactgtccgcagccaagttctcccgggacttcatcctcatc
tccgagttctcggagcaggtgggaccccagcccttgctgaccgtccccaatgacaccaaa
gtgttcggtacttttgatctcaattacttctccttgcggatcatgtctgtggattaccag
gcttccttcgtgggccacccccccgggtcggcctacccgaagctgcacttcgtggaggac
tccaaggtggtcctgggagactccaaggagggagccttcgcctacgtgcaccacctcacc
ctgtacgacctggaggcccgtggcttcgtgaggcccttctgcatggcttacatctccgca
gaccagcacaagatcatgcagcagtttcaggagctttcagctgagttttccaaggcgtct
gagtgcttgaagacaggcaacaggaagtcctttgctggggagctggagaagaaactaaaa
gacttggattacacccggacggtgctgcataccgagacggagatccagaagaacgccaac
gacagagggttttactcatcgcaggcaattgagaaggccaatgaactggccagtgtggag
aaatccatcatcgagcaccgagacctgctgaagcagatccgctcgtaccctcatcggaag
gtgaaggggtctgatttgtgttctggggcggtggggcacacccaggatcagcctgaccag
gcagccactacctctaatcctgatgagcgtgccgacacagacctatacacctccagacct
gcctacaccccaaaactcatcaaggccaagtccgccaagtgttttgacaagaagttgaag
accttggaagagctctgtgacactgagtacttcacccagaccctggctcagctcagccac
attgagcacacgttcagaggagacctgtgctatctcctgaccagccagatcgacaaagcg
ctgctaaagcaacagcacataacgaatttcctctttgaagactttgtggaggtcgatgag
agggtggtagagaaacaagccagcacaccccctcagcccagtcaagacaggccgccttcc
gggtccctaggagaatgtccaattcctcaagtgttaattagcgttggctcctacaagtcc
agtgtggagtctgtgctcatcaagatggagcaggaacttggagaggaggagtacagggaa
gtggaggggacaggactgagcagctttgacccccaggaaaacttggactacctggatatg
gacatgaaagggagcgtcagcagtggggaaagcatcgaggttctaggcacggagaagccc
acctgtgtgctggccacgtccgacagccaggccagcctcacggtgtcactgagcccccag
gtggtccggagcaaagctgtcagccacaggacagtcagtgaggacagcatcgaggtcctc
agcacctgcccttccgaggccctcatccctgaggacttcaaggccagctacccaagtgcc
attaatgaagaggagtcatatgcggatgacagtgagggagccatccacttccaggtaggc
gtcagcctgccggagctgggagaagccgaggaagggagcctagaaaacgccacctcacag
gcagactcctgctgcatcgggaaggagagcgacagtctgcaggggccgctctccactcca
gcccccacactctctgacaagaatggagtagtgagcacccccccgcagcgctacaggcag
aaggaccagggcttccacgtggacttcacggtggaaaacgccagcccttcttcccgagac
aacagttccgaaggctgccctgcctatgagctggacccgagtcacctgctggctagccgg
gacgtcagtaagaccagcttggacaactactcagacaccaccagctacgtgagcagtgtc
gcctccagcagctgggacaggactccctcctctgctcatcccgccggcgcctcttctgag
aggcataaaaagagggctggccagaatgccttaaaattcatccgtcagtatccctttgcc
cacccagccatctactccctgctcagcggaaggacactcgtggtcctgggggaggacgag
gccatagtcaggaagcttgtgacagcgttgtccatcttcatccccaactacagccgctat
gccaaacccgtgaagcactgggtctcctcccctttgcacattatggattttcagaagtgg
aagcttattggcctgcagagatcggcgtcccctgccagcgctggcactctgcacgcgctg
agccgctacagccgctacgcgagcgtcctggacctggacaacaaaaccctgcgctgccct
ctgtaccgcggcaccctcgtgcctcggctggcagaccaccgtacgcagatcaagcggggc
agcacctactacctgcacgtgcagagcatgctcgcccagctctgctccaaggccttcctc
tacaccttctgccaccacctgcacctgccagcccacgaccaggacacacaggagctgctt
gccagccggcaggccagcttcttgaagctgaatcttggtctcgtgaatgaagacgtgaag
gtggtccagtacctggctgagctgctcaagctgcattacatgcaggagtctcctgggacc
agccaccccatgctcagggcgtttgctcggaagctcagcctccacgatggtccctggtcc
cgaaggcaggccaggcaggtgttaccagaagacggccctgcagcgcccaccacagaaaga
gcaaacggagcggctccctggagttgttcttcacgaagaagagggatcttaaagtggtac
ttggactga
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