Rhinolophus hipposideros (lesser horseshoe bat): 308488373
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Entry
308488373 CDS
T12007
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rhii04040
]
308488373 (SCN4A)
Ion channels [BR:
rhii04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
308488373 (SCN4A)
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
308488373
NCBI-ProteinID:
XP_080884162
LinkDB
All DBs
Position
20:complement(40907196..40935832)
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AA seq
1874 aa
AA seq
DB search
MARPSLPTLVPLGPESLRPFTRESLAAIEQRAVEEEARQLRNKQMEIEEPERKPRSDMEA
GKNLPLIFGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSII
RRGAIKVLIHSYPARASGARAEPGGGEQGTLGISKTGRSGFWARRSSVHLPSPPAPSLSL
TLPPTLFSLFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKVLARGFCVDGF
TFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQS
VKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYSNDTWYDNDTW
YDNDTWSSQESRASNYTFDWDAYINDEGNFYFLEGALDALLCGNSSDAGQCPEGYKCIKA
GRNPNYGYTSYDTFSWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMLFFVVIIFLGSFYL
INLILAVVAMAYAEQNEANMAEDLEKEEEFQQMLEKYKKHQEDMEKAKAAQALEDEEADG
DPAHGKDCNGSLDTSPGEKGPPRPSCSADSGISDAMEELEEAHQKCPPWWYKCAHKVLIW
NCCAPWVKFKSIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLNVGNLVFT
GIFTAEMVLKLIALDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK
LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISEDCS
LPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFL
ALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGKILSPKEIVLSL
GWPGEAGESAPEDEKEPPPEEGDKDLKKDNHILNHVGLADGTPPSIELDHLNFINNPYLT
IHVPIASEESDLEMPTEEETDTFSEPEDIKKPPQALDGNSSVCSTVDYKPPEEGPEEQVQ
EDPDGEQPEECFTEACVQRCPCLYVDVSQGRGKKWWTLRRACFKIVEHNWFETFIVFMIL
LSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLDF
LIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTAERFDVSEINNKSECESLMYTGQVRWVN
VKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNIYMYLYFVIFIIFG
SFFTLNLFIGVIIDNFNQQKKKMRKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIL
GKVYDFVTKQMFDIMIMVLICLNMVTMMVETDDQSQLKVDILYNINMIFIIIFTGECVLK
MLALRHYYFTVGWNIFDFVVVILSIAGLALSELIQKYFVSPTLFRVIRLARIGRVLRLIR
GAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDMFNFETFG
NSMICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGSHVKGNCGNPSIGICFFCSYII
VSFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIAYERLSDF
VDTLQVPLRIPKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKETMEE
KFMAANPSKVSYEPITTTLKRKHEEVCAVKIQRAYRRHLLQRSVKQASYMYRHSKDDSGD
GAPEKEGLIANAMSKMYGHENGDSGVQDKGEERGVTGDAGPAMALRHISPADTALPPAPP
LGQTVRPGVKESLV
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccgtctctgcccaccctggtgcctctgggccccgaaagcctgcgccccttc
acccgggagtccctggcagccatagaacagcgtgccgtggaggaggaggcccggcagctg
cggaacaagcagatggagatcgaggagcctgaaaggaagccgcgaagtgacatggaggct
ggcaagaacctgccccttatctttggggaccctccaccagaggtcatcggcatccccctg
gaggacctggacccctactatagtgacaagaagaccttcatcgtgctcaacaagggcaaa
gccatcttccgcttctctgccacgcccgctctctacatgctgagccccttcagcatcatc
agacgaggcgccatcaaggtgctcatccactcatatcctgcccgagcgagtggggcgcgt
gcagagccgggagggggggagcaggggacgttaggcataagcaaaactgggcgttctggg
ttctgggcaaggaggtcctctgtccacctcccctccccacctgctccctcactttccttg
acccttcccccaacgctgttcagtttgttcatcatgatcaccatcttgaccaactgcgtg
ttcatgaccatgagcgacccgcccccctggtccaagaacgtggagtacaccttcacaggg
atctacacgtttgagtccctcatcaaggtgctggcccgaggcttctgcgtcgatggcttc
acattcctccgggacccctggaactggctggacttcagcgtcatcatgatggcgtacctg
acggaatttgtggacttgggcaacatctcagccctgagaacctttcgggttctgcgagcc
ctgaaaaccatcacagtcatcccaggactgaagacaattgtgggggccctgatccagtcg
gtgaaaaagctgtcagatgtcatgatcctcaccgtcttctgcctgagtgtctttgccctg
gtggggctacagctcttcatgggaaacctgcggcaaaagtgtgtgcgctggcccccgccc
ttcaacgacaccaacaccacgtggtacagcaatgatacatggtacgacaatgacacgtgg
tacgacaatgacacctggagcagtcaggagagcagggctagcaactacacctttgactgg
gatgcctacatcaatgatgaagggaacttctatttcctggagggcgcgttggacgccctg
ctctgtgggaacagcagtgacgctgggcaatgccccgagggttacaagtgcattaaagct
gggaggaaccccaactatggctacaccagctatgataccttcagctgggccttcctgtct
ctcttccgcctcatgacacaagactattgggagaacctctttcagctgacccttcgagca
gccggcaagacctacatgctcttctttgtggtcatcatcttcctgggctccttttacctc
atcaatctgatcctggcagtggtagccatggcgtatgctgagcagaatgaggccaacatg
gctgaggatctagagaaagaagaggagtttcagcagatgctggagaaatacaaaaagcac
caggaggacatggagaaggccaaagctgcccaggctctggaagatgaggaggcagatggt
gacccagcccatggcaaagactgcaatggcagcctggacacatcaccaggggagaagggg
cccccgaggccgagctgcagtgcagacagtggcatctcagatgctatggaggaattggaa
gaggcccaccagaagtgcccgccatggtggtacaagtgtgcccacaaagtgctcatatgg
aactgctgcgcgccatgggtgaagttcaagagtatcatccacctgatagtcatggacccc
ttcgtggacctgggcatcaccatctgcattgtgctcaacaccctcttcatggccatggaa
cattaccccatgacggagcactttgacaacgtgctcaacgtgggcaacctggtcttcaca
ggcatcttcacagcagaaatggtactgaagctcatcgccttggacccctacgagtatttc
cagcagggctggaacgtctttgacagtatcatcgtcaccctcagcctggtggaactgggc
ctggccaacgtgcaggggctgtcggtgctccgctccttccgtctgctgcgggtcttcaag
ctggctaagtcgtggcccacactgaacatgctcattaagatcatcggcaactcggtgggg
gcgctgggcaacctgacgctggtgctggccatcattgtgttcatctttgccgtggtgggc
atgcagctgttcggcaagagctacaaggagtgtgtgtgcaagatctccgaggattgcagc
ctgccccgctggcacatgcacgacttctttcactccttcctcatcgtcttccgcatcctg
tgtggggagtggattgagaccatgtgggactgcatggaggtggccggccaggccatgtgc
ctcaccgtcttcctcatggtcatggtcatcggcaacctagtggtcctgaacctcttcttg
gccctgctgctgagctccttcagtgccgacagcctggcggcctcagacgaggacggcgag
atgaacaacctgcagattgccatcgggcgtataaagtggggcattggcttcgccaaggcc
ttcctgctgggactactgcatggcaagattctgagccccaaggagatcgtactcagcctc
gggtggccgggggaggccggggagagtgcccccgaggacgagaaggagccaccacctgaa
gaaggtgacaaggacctaaagaaagacaatcacatcctgaaccacgtgggcttggctgat
gggactcctcccagcattgagctggaccacctcaacttcatcaacaacccctacctgacc
atccacgtgcccatcgcctctgaggaatctgacctggagatgccgacagaggaggagact
gacaccttctcagagcctgaggatattaagaagccgccgcaggccctcgatgggaactcc
tccgtctgcagcacagttgactacaagccccccgaggagggccctgaggaacaggtccag
gaggaccctgacggggagcagcctgaggagtgcttcaccgaggcttgtgtgcaacgctgc
ccctgcctctatgtggacgtctcccagggtcgtgggaagaagtggtggaccctccgcagg
gcgtgcttcaagatcgtcgagcacaactggttcgagaccttcattgtcttcatgatcctg
ctcagcagtggagccctggccttcgaggacatctacatagagcagcggcgtgtcatccgc
accatcctggagtatgctgacaaggtctttacctacatcttcatcctggagatgctgctc
aagtgggtggcctacggcttcaaggtgtacttcaccaacgcctggtgctggctcgacttc
ctcatcgtggatgtctcaatcatcagcctggtggccaactggctgggctactctgagctg
ggacccatcaaatccctgcggacgctgcgggcccttcgtcccctgagggcactgtcccga
tttgagggcatgagggtggtggtgaatgccctcctgggagccatcccctccatcatgaac
gtgctgctcgtctgcctcatcttttggctcatctttagcatcatgggtgtcaacctgttt
gccggcaagttctaccactgcatcaacaccaccaccgctgagaggttcgacgtctctgag
atcaacaacaagtcggagtgcgagagcctcatgtacacgggccaggtccgctgggtcaat
gtcaaagtcaactatgacaacgtgggcctaggctacctctccctcctgcaggtggccacc
ttcaaaggctggatggacatcatgtatgcagccgtggactcccgggagaaggaggaacag
ccacaatacgaggtgaacatctatatgtacctttatttcgtcattttcatcatcttcgga
tccttcttcaccctcaacctcttcatcggtgtcatcatcgataacttcaaccagcagaaa
aagaagatgaggaaagacatcttcatgacagaggaacagaagaaatactataatgccatg
aagaagcttggctccaagaagccccagaagccaattcctcgtccccagaacaagatcctg
ggcaaggtgtacgactttgtgacaaagcagatgttcgacatcatgatcatggtcctcatc
tgcctcaacatggtcaccatgatggtggagacggacgaccagagccagctcaaggtggac
atcctgtacaacatcaacatgatcttcatcatcatcttcaccggagagtgtgtgcttaag
atgctggccctgcgccattactacttcactgtcggctggaacattttcgattttgtggtt
gtcatcctgtccattgcaggcctcgcactctctgagctgatccagaaatacttcgtgtca
cccaccctgttccgtgttatccgcctggcgcggatcgggcgcgtcctgcggcttattcgt
ggagccaaagggatccggacgctgctctttgccctcatgatgtccctgcctgccctcttc
aacatcggcctcctcctcttcctggttatgtttatctactccatcttcggcatgtccaac
tttgcctacgtcaagaaggagtcaggcatcgatgacatgttcaactttgagaccttcggc
aacagtatgatctgcctctttgagatcaccacgtccgccggctgggacgggctcctcaac
cccatcctcaacagtgggccccctgactgtgaccccaccctggagaacccgggcagccac
gtcaagggcaactgtggcaacccctccatcggcatctgcttcttctgcagctacattatc
gtctccttcctcattgtggtcaacatgtacatcgccatcatcctggagaacttcaacgtg
gccaccgaggagagcagtgagcccctcggcgaggatgactttgagatgttctacgagacg
tgggagaagttcgaccccgacgccacacagttcatcgcctacgaacgcctctctgacttc
gtggacaccctgcaggtgccgctgaggattcccaaacccaacaagatcaagctcatcacg
ctggacttacccatggtgcctggcgacaagatccactgcctggacattctcttcgccctg
accaaggaggtcctgggcgactcaggggagatggacgccctcaaggagaccatggaggag
aagttcatggctgccaatccctccaaggtctcctatgagcccatcaccaccaccctcaag
aggaagcacgaggaggtgtgcgccgtaaagatccagagggcgtaccgccgacacctactc
cagcgctcagtgaagcaggcatcctacatgtaccgccacagcaaggatgacagcggggac
ggggcccctgagaaggaggggctgatcgccaacgccatgagcaagatgtacggccacgag
aatggggacagtggtgtgcaggacaagggtgaggagagaggcgtgacaggggacgctgga
cctgctatggcgctcaggcacatcagccctgcagacactgccctccctcccgccccaccc
ctggggcagacagtacgcccgggggtcaaagagtctctggtctag
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