Rhinolophus hipposideros (lesser horseshoe bat): 308491551
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Entry
308491551 CDS
T12007
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform 1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii04015
Rap1 signaling pathway
rhii04517
IgSF CAM signaling
rhii04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
308491551 (RAPGEF6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
308491551 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
308491551 (RAPGEF6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
308491551
NCBI-ProteinID:
XP_080891451
LinkDB
All DBs
Position
23:complement(8790978..8970735)
Genome browser
AA seq
1619 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSTRARYERYSG
NQILFCSETIARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDIHSYLSLPADLTKMHITDHPH
PQVPHVPSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMVFEV
VEQAGATILEDGQELDSWYVILNGTVEISHSDGKVENLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKGFGIFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEQTSQEKG
NKKVKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTTAKE
VVCHAVHEFGLAGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNME
TETLCSDEDAQELVKESQLSMLQLSTIELATQLSMRDFDLFRNIEPTEYIDDLFKLESKT
GNTHLKEFEDIVNQETFWVASEILTESNQLKRMKIVKHFIKIALHCRECKNFNSMFAIIS
GLNLASVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPV
VKKDMTFLHEGNDSKVDGLVNFEKLRMIAKEIRQVIRMTSANMDPAMMFRQRKKRWRSLG
SLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKF
QIMSLQLEPAYGTLTKNITEKRSAKLSEMSPVPMRSAGQTAKAHLHQPHRVSQVLQVPAV
NLHPIRKKGQAKDPATLSTSLPQKVLGTSEEISGKKHAEDTISVASSLHSSPPASPQGSP
RKGYTLIPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDDRCSSQAVTVPEPTGV
LEKTEHSSGAGDQSQLGPGWTFSKPSLIKSLAVASSVSNEEISHEHVIIEAADSGRGSWT
SCSSSSHDNFQSLPNPKGWDFLNSYRHTHLDGPIAEVEPPDCEPYSCPKGCSRTCGPCKG
SLETDPMRQSWASSSSLSDSYEPNYGTVKRRVLESGPAESSEGSDAKDGTDPVYKTVTSS
TEEGLIVYCVTSPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLKPPDYSVAVQRSKFM
PHGLSRPPPASLGNSPVACVPSKTVTQPQRHHLQPSHPKLADVTDADSEADENEQVSAV
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggaccccggcgctaggcaggcgctgaagaagaagccgccggagcgc
actcccgaggacttaaatactatttattcttatcttcatggaatggaaatactttcaaac
ctcagggaacatcagcttagattaatgtctacaagagcacgctatgagagatacagtggc
aatcagattcttttttgttcagaaactattgccagatgctggtatatcctgctttctgga
tctgtgcttatgaaagactccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacaatctcgacgg
aggtttcggaaaattaactataaaggagagcgccaaaccattactgatgatgtggatatt
cacagctatctttctcttccagcggatcttacaaagatgcacatcacagaccaccctcat
ccacaggtgcctcatgtaccttctagtcagtctggttgtagcatcgctagtgactctggg
agcagcagtttatctgatatctatcaggccacagaaagcgaggtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagacgaagagatt
gatcggacagatccactgcaggggcgagatcttgttcgagaatgtcttgaaaaggaacct
gcagacaaaactgatgatgacattgaacaattactggagtttatgcaccagctccctgct
tttgcaaacatgaccatgtctgtaaggagagaactctgctcagtgatggtttttgaagtg
gtagagcaggcaggagctactattcttgaagacggacaagagcttgactcatggtatgta
attttaaacggcactgtagaaatcagtcattcagatggaaaagttgaaaatctcttcatg
ggaaatagttttggaattactcccactctggataagcagtacatgcatggcgttgttagg
actaaagtagatgattgtcagtttgtttgcatagcccagcaggattactggagaatttta
aatcatgtggaaaaaaatacccataaagttgaggaagagggagaaattgttatggtgcat
gagcaccgtgaactagatcggagcggaaccaggaaaggacacattgtaatcaaggcgaca
cctgagcgtctcatcatgcatttaatagaggagcattccattgtggacccaacctacata
gaagattttctgttaacttacaggacgtttcttgaaagtcctttggatgttggcatcaaa
ctattggaatggtttaaaattgacagcttaagggataaggtaacacggattgtattattg
tgggtaaataatcattttaatgattttgaaggcgatcctgctatgactcgatttctggag
gaatttgaaaaaaatctggaagatacaaaaatgaatggtcacctccggttgctgaatatt
gcgtgtgctgcaaaggcaaagtggagacaggtggtgctgcagaaggcctcccgggagtcc
ccgctgcatttcagccttaatggagggagtgagaagggatttggtatttttgtcgaagga
gtagaacctggtagcaaagctgctgatgccggactgaaacgaggtgatcagataatggaa
gtaaatggacaaaactttgagaatattacatttgtgaaggcccttgaaattctgaggaat
aacactcatcttgcacttactgtaaagaccaacatttttgtgttcaaagagttacttagt
aggaccgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccattcaatccaggatgtaccaggagatattgaacagacgtcacaggaaaaagga
aataagaaagtaaaagcaaatactgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgatttagtattttgcctccaaaactatttagtgatggaggcctgagccaa
tcacaagatgacagcattgtgggaacaagacactgtaggcatagtttggctatcatgccg
attcctgggacactgtcatccagcagcccggatctcctgcagcctaccaccagcatgttg
gatttttccaatccttcagctgttggtttttactatattcctgatcaagttataagagtt
ttcaaagctgatcaacaaagttgctacattatcatcagtaaagacactacagctaaagaa
gttgtctgtcatgctgttcatgaatttggtttggccggcgcgtccgacacatattctctc
tgtgaagtttctgttactcctgagggtgtcataaaacagagacgacttccggaccaattc
tccaaattagctgatagaattcaacttaatggaaggtattatttaaaaaataacatggaa
acagaaactttatgttcagatgaagatgcccaggaactggttaaggaaagccagctctcc
atgctgcagctcagcaccattgagctggccacccagctgtccatgcgggactttgatctg
tttcgtaatatcgagcctactgaatacattgatgacctttttaagttagagtccaaaaca
ggaaatactcacttgaaagagtttgaggacattgtaaaccaagagacattctgggttgcc
tcagagattttaacggaatcaaatcagcttaaacgaatgaagattgttaagcattttatt
aaaattgcacttcattgtcgagaatgtaagaacttcaattccatgtttgcaataatcagt
ggcttgaacctggcatctgtagcccgactcagaggtacttgggaaaagttaccaagcaag
tatgagaaacacctgcaagatctacaagacctctttgatccatctagaaacatggcaaag
tatagaaatattcttagtagtcaaagtatgcagcctccaattatccccctcttccccgtt
gtcaagaaagatatgacatttctacatgaaggaaatgactccaaagtagatggtttagta
aattttgagaagctaagaatgattgccaaggaaatccgtcaagttattcgaatgacttct
gctaacatggacccagctatgatgttccgacagaggaagaagaggtggcggagtctgggg
tcattgagtcaaggcagcaccaactcaaacatgctggatgttcagggcggtgctcacaaa
aaaagggcacgacgcagctctctgcttaatgctaagaagctgtatgaggatgcccagatg
gcaaggaaggtgaagcagtatctctccagtctggacgtcgagacagatgaggagaagttc
cagattatgtcattgcagttggagcctgcgtacgggaccttgaccaagaatataactgag
aaaagatcagccaagttatcagaaatgtctccagtgcctatgaggtcagctggccaaaca
gctaaagcccatttgcatcagcctcacagagtaagccaggtgcttcaagtgccagctgtt
aatttgcaccccatcaggaagaagggacaagcaaaagaccctgccacattgagtacaagt
ttacctcagaaagttttaggaacaagtgaagaaataagtggtaagaaacatgcagaagac
actatttctgtggcatcatccttacattctagtcctcctgcatctcctcaaggttcccct
cgcaaaggttacacactgataccatcagctaaatctgacaacttatctgactccagccac
agtgagatttcttcacggtccagcattgtgagcaattgttctgtggactccatgtctgca
gctctgcaggacgaccggtgttcctcccaggctgtcacggtccctgaacccaccggggta
ctggaaaagacagagcactcctcaggggcaggagaccagagtcaacttggcccggggtgg
acattctcaaagccatctctaatcaagagtttagctgtcgcatcatctgtgagcaatgag
gagatttctcatgagcacgtcattatagaagcagctgatagtggtcgtggaagttggact
tcctgttcaagcagctcccatgacaacttccaaagccttccaaacccaaaaggctgggat
tttttgaactcgtaccgacatacccatttggacggccccattgccgaagtcgagccccct
gactgtgagccctactcctgccctaaaggctgctctagaacttgtggtccgtgcaaaggc
agcctggagactgatccgatgagacagagttgggcctcctccagttctctgtctgactcg
tacgaaccaaactacgggacagttaagcggagagtgttggagagcggcccagccgagtca
tccgaaggttcggacgccaaggatggaactgacccagtttacaaaactgttacttccagt
acagaggagggcttgattgtgtactgtgtcacctcacccaagaaggaggataggtatagg
gaaccaccgcccactcctccaggatacatggggatttctttagcagacctaaaggaagga
ccccacctccacctaaaacctccagattacagtgtggcagtacagaggtcaaagttcatg
cctcatggcctctctagaccgccgccagcttctctcgggaacagccccgtggcctgtgtt
ccatcgaagactgtaactcagcctcagaggcaccatttgcagccgtcccatcccaaacta
gcagatgtgacagacgcagatagcgaagcagatgaaaatgagcaggtttcagcagtttag
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integrated database retrieval system
