Rhizobium sp. SRDI969: N2A41_14260
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Entry
N2A41_14260 CDS
T11552
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rhis Rhizobium sp. SRDI969
Pathway
rhis00300
Lysine biosynthesis
rhis00550
Peptidoglycan biosynthesis
rhis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N2A41_14260
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N2A41_14260
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhis01011
]
N2A41_14260
Enzymes [BR:
rhis01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
N2A41_14260
Peptidoglycan biosynthesis and degradation proteins [BR:
rhis01011
]
Precursor biosynthesis
Amino acid ligase
N2A41_14260
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
C3_CUB1
Motif
Other DBs
NCBI-ProteinID:
UWM79890
LinkDB
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Position
complement(2828811..2830331)
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AA seq
506 aa
AA seq
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MNIDADSRGVNRIQERKVRAMKLRDLAGDQFPELEAQLEGPAGLLDISGLSSDSRKVAPG
NAFVAVAGTKADGAGFIADAAGRGAAVAIASQAVAAAIPVLAVKEPRRFLSIAAARFHGR
QPDTMVAVTGTAGKTSVASFTRQIWAHAGHAAAMIGTTGIVSPTRNEYGSLTTPDPVSLH
ELLAELAGEGVTHAAMEASSHGLDQCRLDGVKLAAAAFTNLGRDHMDYHPTIEAYMAAKM
RLFDTLLPKGSPAVIFADDPWSAQAIKAATDAGHDVRTVGRKGDYLSLKRVEHFRHKQTA
EIHIGGEIFEVDIPLAGDFQVANALVAAGLAMSTGVEAKVAMAALEKLVGASGRLELVGH
TKDGALAYVDYAHKPDALENVLGSVRPFTTGRVIVVFGCGGDRDRGKRPIMGEIACRLAD
VVIVTDDNPRSEEPASIRAEIMAAASCASEIADRAAAIREAAGMLRSGDTLIVAGKGHEE
GQTIGDVTLPFSDHAEVRKALEDLKS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgacgccgattcgcgaggggtgaaccggattcaagagagaaaagtgcgtgcg
atgaaattgcgagacctggccggagatcagtttccggaacttgaagcacagctcgaaggc
ccggcaggtttgcttgatatttcaggcctgtcttcggacagccgcaaggtggcgccgggc
aatgctttcgtcgcggtcgccggcaccaaggcggacggcgcaggcttcatcgcggatgcc
gccggccgcggcgctgccgtcgcgatcgcctcccaagccgtcgctgctgcgatcccggtg
cttgcagtcaaggagccgcggcgtttcctttccatcgccgccgcgcgtttccatggcagg
cagcccgataccatggtcgccgtcaccggcaccgcgggcaaaacctccgtcgcttctttc
acccggcagatctgggcgcatgccggccacgcggccgcgatgatcggcacgacgggcatc
gtctcgccgacgcgcaacgaatatggctcgctgacgacgcccgatcctgtgtcgctgcat
gagctgttggcggaacttgccggagagggcgtgacgcatgccgctatggaggcctccagc
cacggcctcgaccagtgccggctcgacggcgtgaagcttgcggcagccgccttcaccaat
ctcggccgggaccacatggattatcatccgacgatcgaggcctatatggccgccaagatg
cggcttttcgatacgctgttgccgaagggatcgccggcggtgatcttcgctgacgatccg
tggtcggcgcaggcgatcaaggccgcgaccgatgccggtcacgatgttcgtaccgtcggg
cgaaagggtgactacctctcgttgaagcgggtcgagcacttccgccacaagcagacggcc
gagatccatatcggcggcgagatcttcgaggtggacattccgctggccggcgacttccag
gtcgccaacgcactggtcgcggcggggcttgccatgtcgaccggcgttgaggcgaaggtt
gcgatggccgcgctcgagaagctcgtcggcgcgtccggccgtctcgaacttgtcggccat
acaaaagacggggcgctcgcctatgtcgattacgcccacaagccggacgcgctggaaaac
gtgctgggctcggtcagacccttcaccaccggccgcgtcatcgtcgtcttcggctgcggc
ggcgaccgtgaccgcggcaagcggccgatcatgggcgaaatcgcctgccgacttgccgac
gtcgtcatcgtcaccgacgataatccgcgttcggaggagccggcctcgatccgggcggag
atcatggcggcagcaagctgcgcctcggaaattgccgatcgcgccgcggcgatccgcgag
gctgcgggcatgctgagatccggggatacgctgatcgtcgccggaaaggggcatgaggaa
gggcagacgatcggcgacgtcaccctgccgttttccgatcatgcggaggtgcgcaaggcc
ttggaggacctgaaatcttga
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