Rhizobium sp. SRDI969: N2A41_17510
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Entry
N2A41_17510 CDS
T11552
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rhis Rhizobium sp. SRDI969
Pathway
rhis01501
beta-Lactam resistance
rhis01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhis00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N2A41_17510
01503 Cationic antimicrobial peptide (CAMP) resistance
N2A41_17510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhis03036
]
N2A41_17510
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhis02000
]
N2A41_17510
01504 Antimicrobial resistance genes [BR:
rhis01504
]
N2A41_17510
Chromosome and associated proteins [BR:
rhis03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N2A41_17510
Transporters [BR:
rhis02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N2A41_17510
Antimicrobial resistance genes [BR:
rhis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N2A41_17510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
HH_EMRA
BSH_CusB
HH_YBHG
PPE-PPW
HH_AAEA_pHBA
Biotin_lipoyl
YknX_C
BSH_YknX
Beta-barrel_RND_2
BSH_LcnD
OEP
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UWM80481
LinkDB
All DBs
Position
3508441..3509652
Genome browser
AA seq
403 aa
AA seq
DB search
MIRRALLVPSALAFAALLAACSDSGSKPAGNAGAGAAQQAAPVGVIALTKGTFPITTILP
GRAETFQTADIRPQVSGLIREVAFKEGGEIKKGDLLYQIEDAPYIAAVEQAKAAISKAQA
SVPSAESNLDRYQRLVGSGATQIEFETAKTTLLQAKAEVESAKAALSAAQIDLDHTRIVA
PFDGIIDQTAVNVGNVVSANQTTALTTIRQLDPIYISLTESSTNLLRLRDAMAAGNIEGA
ENVAFHLILEDGKEYNQQGKLDMSKQVVSETTGTFIIRVLFPNPDRIVLPGMYVRATVEL
GAEAGYALPQLATSRDANGRLTAQFVSADGEVETRAFENSSPSNNSWLVTEGIKDGDQLI
VTGLQSVTVGMPVKPVPMKINDNGVVVPAEQPAAGDAEKAAAK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatacggcgtgccctcctcgttccctcggccctggcattcgcagcccttctcgccgcc
tgcagcgacagtggctccaagcctgcgggcaatgcgggcgcaggcgcggcacagcaggct
gccccggtcggcgtgatcgcgttgacgaagggcacgttcccgatcaccaccatcctgcct
ggccgtgccgagacatttcagaccgccgatatccggccgcaggtgagcggcctgatccgc
gaggtcgcctttaaggaaggcggcgagatcaagaagggcgaccttctctaccagatcgag
gatgcaccctacatagccgccgtcgagcaggccaaggcggcaatctccaaggcgcaagcc
agcgtaccgagcgctgaaagcaatctcgaccgctaccagcgcctcgtcggcagcggtgcc
acccagatcgaattcgaaacggctaagacgacgctgctccaggccaaggccgaagtcgag
tcggcgaaggccgcgctttccgccgcacagatcgacctcgaccataccaggatcgtcgcc
ccttttgatggcatcatcgaccagacggccgttaatgtcggcaacgtcgtctctgccaac
cagacgacggcgctgacgaccatccgccaactcgatccgatctatatctcgctgacggaa
tcgagcaccaacctgctgaggttgcgcgatgcgatggccgccggcaacatcgagggtgcg
gagaacgtcgccttccacctgatcctcgaagacggcaaggaatacaatcagcaaggcaag
ctcgacatgtcgaagcaggtcgtcagcgagaccactggcaccttcatcattcgtgtgctc
tttcccaatcccgaccgcatcgtgctgcccggcatgtatgtccgcgcaaccgtcgagctc
ggcgccgaggccggttatgcgctgccgcagctggcgacaagccgtgacgccaacggccgg
ctgacggcacaattcgtttccgccgacggcgaggtcgaaacccgcgccttcgagaacagt
tcgccctccaacaattcctggctcgtgaccgaaggcatcaaggacggcgatcagctgatc
gtcaccggcctccagtccgtcacggtgggcatgccggtgaaaccggtcccgatgaaaatc
aatgacaacggcgtggtcgtgcctgccgaacagcctgcggccggtgacgctgagaaggct
gcagcgaaataa
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