Rhizobium sp. WYJ-E13: KQ933_12695
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Entry
KQ933_12695 CDS
T11043
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw00300
Lysine biosynthesis
rhiw00550
Peptidoglycan biosynthesis
rhiw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KQ933_12695
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KQ933_12695
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhiw01011
]
KQ933_12695
Enzymes [BR:
rhiw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KQ933_12695
Peptidoglycan biosynthesis and degradation proteins [BR:
rhiw01011
]
Precursor biosynthesis
Amino acid ligase
KQ933_12695
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
QWW66481
LinkDB
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Position
complement(2514347..2515807)
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AA seq
486 aa
AA seq
DB search
MKLRDLAGNAFPELKAELDGPAGVLEISGLSSDSRKIAPGMAFVAIAGSKADGAGFIADA
VAKGAAVVIASHAVETRAPVLVVAEPRRFLSVAASRFYGRQPATMVAVTGTAGKTSVASF
VRQIWAHAGHAAAMIGTTGVVSPTRNEYGSLTTPDTVSLHQLLAELADEGVTHASMEASS
HGLDQYRLDGVKLAAAAFTNLGRDHMDYHPTVEDYMAAKMHLFDRVLPKGSPAIIFADDP
WSEQAIKVATAAGHDVRTVGRKGSYLTLKRVEHFRHKQVAEIHAEGEIFEVDIPLAGDFQ
IANVLVAAALAMSTGVPAKLAMAALEKLQGASGRLQLVGHTKDGALAYVDYAHKPDALEN
VLNSVRPFTTGRVIVVFGCGGDRDRGKRPIMGEIACRLADVVIVTDDNPRSEEPAAIRAE
IMAAAKCASEIGDRAKAIREAVLQLKSGDTLIVAGKGHEEGQTVGSVTLPFSDHAEVRKA
LEERVP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcgggacctcgccggaaatgcgtttccggaactcaaagctgaactcgatggg
ccggccggcgtgctggagatttccggtctgtcttccgatagccgcaagatcgcgcccggc
atggctttcgtggcgattgccggctccaaggccgatggggcaggcttcattgccgatgct
gttgccaagggtgctgccgtcgtcatcgcatcgcacgcagtcgaaacccgcgcgccggtt
ctggtcgttgccgaaccgcgtcgattcctctccgttgccgcctcgcgtttctacggccgc
cagccggcgacgatggtcgcggtgacgggtaccgccggcaagacctcggttgcctccttc
gtcaggcagatctgggcgcatgccggccacgctgccgccatgatcggcacgaccggcgtc
gtttcgccgacgcgcaacgaatatggctcgctgacgacgcccgataccgtatcgctgcac
cagctgcttgccgaactcgccgacgagggcgtcacgcatgcttctatggaggcctccagc
cacgggctcgaccagtatcgcctcgacggcgtgaaacttgccgccgccgcattcaccaat
ctcggccgcgaccatatggattaccatccgacggtcgaagactatatggccgccaagatg
cacctcttcgaccgggtgctgccgaagggttcgcccgccatcatcttcgccgatgatcca
tggtctgagcaggcgatcaaggtggcgacggctgctggccatgacgttcgcacggtcggg
cgcaagggcagctatctgacgctgaagcgcgtcgagcatttccgccataagcaggttgcg
gaaatccatgccgaaggcgagatcttcgaggtcgatattccgcttgccggcgatttccag
atcgccaatgtgctggttgccgcggcccttgccatgtccacgggcgttccggcgaagctc
gcgatggccgcgctcgaaaagctgcagggcgcgtccggccgcctgcagctggtcggccat
accaaggatggcgcgcttgcctatgtcgattacgcccacaagccggacgcgctggaaaat
gtgttaaactcggtgcgtccgttcacgacgggccgcgtcatcgtcgtgttcggctgcggc
ggcgaccgtgaccgcggcaaacgaccgatcatgggcgagatcgcctgccggcttgccgat
gtcgtgatcgtcaccgatgacaatccgcgctcggaagagccggcggcgatccgtgccgag
atcatggcggcggcgaaatgcgcttccgagatcggcgaccgtgcaaaggcgatccgcgag
gcggtcctgcagctgaaatccggcgatacgctgatcgttgccggcaagggacatgaagag
gggcagacggtcggcagcgtcacgctgccgttttccgatcatgccgaagtgcgcaaggct
ttggaggagcgggtaccatga
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