Rhizobium sp. WYJ-E13: KQ933_17215
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Entry
KQ933_17215 CDS
T11043
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KQ933_17215 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_17215 (nth)
Enzymes [BR:
rhiw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KQ933_17215 (nth)
DNA repair and recombination proteins [BR:
rhiw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KQ933_17215 (nth)
Prokaryotic type
KQ933_17215 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
HHH_5
PsbU
Motif
Other DBs
NCBI-ProteinID:
QWW67330
LinkDB
All DBs
Position
3451905..3452711
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AA seq
268 aa
AA seq
DB search
MAAEYRFSMANPKLKSITKPSQDSNVIVRRKPAAAVKTVYSLAEREEIFRRFSIQRPEPR
GELEHTNPFTLVVAVALSAQATDVGVNKATRALFKVADTPQKMLDLGEEKVRDYIRTIGL
YRNKAKNVIALSQMLVDKFGGKVPETREELVRLPGVGRKTANVVLSMAFGQATMAVDTHI
FRIANRIKLAPGKTPDEVEERLMKVVPQHYLYHAHHWLILHGRYTCKARRPECERCVIAD
ICKSPEKSCDIPAPLVELPPQVIGEAVE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagtatagattttccatggcgaatccgaaactcaaatccattaccaaaccg
tcgcaagactcgaatgtgatcgtcaggcgcaagccggcggcggcggtgaagaccgtctat
tcgcttgccgaacgggaggagatcttccgccgcttctccattcagcgtccggagccgcgg
ggcgaactggaacacaccaatcccttcaccctcgtcgtggcggtggcgctctccgcccag
gcgaccgatgtcggcgtcaacaaggcgacgcgcgcgctcttcaaggtcgccgatacgccg
cagaaaatgctcgatctcggcgaggaaaaggtccgtgactacatcaggacgatcgggctt
tatcgcaacaaggcgaagaacgtcattgcgctctcgcagatgctggtcgacaagttcggc
ggcaaggtgccggagacgcgcgaggagttggttcgcctgccgggcgtcggccgaaagacc
gccaatgtcgtactatcaatggctttcggccaggcgacgatggccgtcgacacccacatc
ttccgcattgccaaccgcatcaagctcgcaccgggcaagacgcccgacgaggtggaagag
cggctgatgaaggtcgtgccgcaacactacctctatcacgcccatcactggctgatcctg
cacggccgctatacttgcaaggcccggcggccggaatgcgaacgctgcgtgatcgccgat
atctgcaaatcgccggaaaagagttgcgatatcccggcaccgctggtcgaactacctccg
caggtgatcggcgaggccgtcgagtag
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