Rhodococcus sp. JS3073: OYT95_01210 Help Entry OYT95_01210       CDS       T10731                                  Name (GenBank) malate dehydrogenase   KO K00024   malate dehydrogenase [EC:1.1.1.37] Organism rhjs  Rhodococcus sp. JS3073 Pathway rhjs00020   Citrate cycle (TCA cycle) rhjs00270   Cysteine and methionine metabolism rhjs00620   Pyruvate metabolism rhjs00630   Glyoxylate and dicarboxylate metabolism rhjs00680   Methane metabolism rhjs00710   Carbon fixation by Calvin cycle rhjs00720   Other carbon fixation pathways rhjs01100   Metabolic pathways rhjs01110   Biosynthesis of secondary metabolites rhjs01120   Microbial metabolism in diverse environments rhjs01200   Carbon metabolism Module rhjs_M00009   Citrate cycle (TCA cycle, Krebs cycle) rhjs_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate rhjs_M00012   Glyoxylate cycle rhjs_M00168   CAM (Crassulacean acid metabolism), dark rhjs_M00982   Methylcitrate cycle Brite KEGG Orthology (KO) [BR:rhjs00001]  09100 Metabolism   09101 Carbohydrate metabolism    00020 Citrate cycle (TCA cycle)     OYT95_01210    00620 Pyruvate metabolism     OYT95_01210    00630 Glyoxylate and dicarboxylate metabolism     OYT95_01210   09102 Energy metabolism    00710 Carbon fixation by Calvin cycle     OYT95_01210    00720 Other carbon fixation pathways     OYT95_01210    00680 Methane metabolism     OYT95_01210   09105 Amino acid metabolism    00270 Cysteine and methionine metabolism     OYT95_01210 Enzymes [BR:rhjs01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.1  With NAD+ or NADP+ as acceptor     1.1.1.37  malate dehydrogenase      OYT95_01210 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ldh_1_N Ldh_1_C UDPG_MGDP_dh_N Pyr_redox_2 TrkA_N DAO ThiF NAD_binding_8 Motif Other DBs NCBI-ProteinID:  WAM15324 LinkDB All DBs Position 255286..256617 Genome browser AA seq 443 aa AA seqDB search MTVFGVDAVEAATESTVAELVVGPKDIVTPLARERARERGITVIVGSPRSGGGTPTPPTV RNGSAPTPVPPEAPAFRRPRSNGFQAPPRPLRPPAPALYRRGAPLDPAVAPAVLHRPRST PPSQPASSKSVHRVVVVGAGHVGMITAMKLAEANIIEEVVLVDIADGLAAGIALDLTHST ALLGFDTKVRGVTRLADAGVADYVVITAGRARQPGMSRTDLVEVNAGIVGGLARDAAAVS PNTVLLIVTNPLDEMTHHAWQAAGLPAERVIGMAGVLDSSRFQALTGLATQSAPSDITAL ALGSHGDEMVIPLSQARVAGTSITQTLPQGAVTALVDRARNSGAEVVGLLKSGSAFFAPG ASAARMVLAMATDSDEVIAATVRARGQYGISDGYVGLPTKLGRGGLKEIVELPLAEDELA AVRTAAARISERVSVLEKATVAS NT seq 1332 nt NT seq  +upstreamnt  +downstreamnt atgaccgtcttcggggtcgatgcggtcgaggcggccaccgagtcgacagtggcggaactc gttgtgggcccgaaggacatcgtgaccccgctggcgcgggagcgtgcccgggaacgagga atcacggtcatcgtcggaagcccccgttccggcggcggaaccccgacacctccgacggtc cgaaacggatcggcaccaacaccggtgccaccggaggcgccggccttccgccggccgcgg tcgaacggatttcaggcgccgccccggccgctacggccgcccgcccccgcgctgtatcgg cgaggcgcaccgctggacccagctgtcgcaccggcggtcctgcaccgcccccgctccacc ccaccgtcacagccggcgagcagcaaatccgttcacagagtcgtggttgtcggcgccgga cacgtcggcatgatcaccgccatgaagctcgccgaggcgaacatcatcgaggaagtcgta ctcgtcgatatcgctgacgggctcgccgcgggcatcgcattggatctgacacactcgacg gcgttgctggggttcgacaccaaggttcgcggggtcacgcgcctggccgacgccggtgtc gccgactacgtcgtcatcaccgcaggaagggcccgccaacccggaatgagtcgcaccgac ctcgtggaggtgaacgccgggatcgtcggtgggctcgcccgcgacgccgccgcagtctcc cccaacaccgtgttgctgatcgtgacgaatccattggacgagatgacgcaccacgcgtgg caggccgccgggctcccagccgaacgcgtgatcggcatggctggcgtactcgacagctcc cgtttccaggccctcactggcttggccacccaatccgcaccctccgacatcaccgcactg gcgctgggcagtcatggtgacgagatggtcatccccctgtcccaagccagagtcgccggc acctcgatcactcagactcttccgcagggcgcagtcaccgcactcgtcgaccgcgcacgc aattccggtgccgaggtcgtaggtttgctcaagtccggaagcgcgttcttcgcccccggc gcctcggccgcccggatggtcctggccatggccaccgattccgacgaggtcatcgcggcg acggtccgcgctcgcggccagtacggcatcagcgacggctacgtcggattgcctaccaag ttggggcgcggcggactaaaggagatcgtcgagcttccactcgccgaggacgagctcgcc gcggtacggactgctgccgcgcggatatccgagcgagtctcggttctcgagaaagcgacg gtcgcctcatga

Rhodococcus sp. JS3073: OYT95_05295 Help Entry OYT95_05295       CDS       T10731                                  Name (GenBank) malate dehydrogenase   KO K00024   malate dehydrogenase [EC:1.1.1.37] Organism rhjs  Rhodococcus sp. JS3073 Pathway rhjs00020   Citrate cycle (TCA cycle) rhjs00270   Cysteine and methionine metabolism rhjs00620   Pyruvate metabolism rhjs00630   Glyoxylate and dicarboxylate metabolism rhjs00680   Methane metabolism rhjs00710   Carbon fixation by Calvin cycle rhjs00720   Other carbon fixation pathways rhjs01100   Metabolic pathways rhjs01110   Biosynthesis of secondary metabolites rhjs01120   Microbial metabolism in diverse environments rhjs01200   Carbon metabolism Module rhjs_M00009   Citrate cycle (TCA cycle, Krebs cycle) rhjs_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate rhjs_M00012   Glyoxylate cycle rhjs_M00168   CAM (Crassulacean acid metabolism), dark rhjs_M00982   Methylcitrate cycle Brite KEGG Orthology (KO) [BR:rhjs00001]  09100 Metabolism   09101 Carbohydrate metabolism    00020 Citrate cycle (TCA cycle)     OYT95_05295    00620 Pyruvate metabolism     OYT95_05295    00630 Glyoxylate and dicarboxylate metabolism     OYT95_05295   09102 Energy metabolism    00710 Carbon fixation by Calvin cycle     OYT95_05295    00720 Other carbon fixation pathways     OYT95_05295    00680 Methane metabolism     OYT95_05295   09105 Amino acid metabolism    00270 Cysteine and methionine metabolism     OYT95_05295 Enzymes [BR:rhjs01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.1  With NAD+ or NADP+ as acceptor     1.1.1.37  malate dehydrogenase      OYT95_05295 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ldh_1_C Ldh_1_N Motif Other DBs NCBI-ProteinID:  WAM16047 LinkDB All DBs Position 1092299..1093294 Genome browser AA seq 331 aa AA seqDB search MAQSPSPAVVTVTGAAGSIGYAALFRIAAGAMLGPDTPIRLRLLEIPSAVSAAEGTAMEL DDSAFPLLRDVEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAANGQIFTVQGRAIN QVAADGVRVLVVGNPANTNALVAANNAPDIPAERFTALTRLDHNRAIAQLARRSGAAVKD IRRVAIWGNHSSTQYPDIFHARVGDRSGAEFAADREWLTGDFIPTVANRGSAIIEARGAS SAASAANAAIDHVHDWVLGTPEDDWTSVALPSTGAYGVPEGLVSSFPVRSVDGSWQIVDG LEIDDFSRKRIDASVAELESERDAVRVMGFI NT seq 996 nt NT seq  +upstreamnt  +downstreamnt atggcgcagtcgcccagtcccgcagtggtcacggtcaccggagcggcaggcagcatcggc tacgcggcactgttccggatcgctgcaggcgcgatgctcggacccgacaccccgatccgg ctgcggctcttggagattccgtccgccgtgtccgctgccgaaggtaccgccatggaactc gacgacagcgccttcccgctgctccgcgacgtcgaggtccacgacgacccgaagcgaggc ttcgacggcaccgatgtggcgctcctcatcggatcgcgtccccggtccaagggcatggag cgtggcgacctgctggccgcgaacgggcagatcttcaccgtgcagggtcgcgcgatcaac caggttgccgcggacggagtccgggtgctggtcgtgggcaacccggccaacaccaacgcg ctggtcgccgcgaacaacgcccccgacatccccgcggagcgattcacggcgctgacccgg ctcgaccacaatcgcgcgatcgcccagctggcacggcgctccggcgccgcggtgaaggac atccgccgcgtcgcgatctggggtaaccactcgagcacccagtaccccgacatcttccat gcgcgggtcggggaccggtccggtgcggagttcgccgccgaccgcgaatggctcaccggc gacttcattcccacggtcgcgaaccgtggcagcgcgatcatcgaggctcgcggcgcatcc tccgcggcctccgccgccaacgccgcgatcgaccacgtccacgactgggtgctcggcacc cccgaggacgactggacctctgtggcgctgccctccaccggcgcctacggcgtgccggag ggattggtgagctcgttcccggttcgctcggtcgacgggtcgtggcagatcgtggacggc ctggagatcgacgatttctcacggaagcggatcgacgcgtcggtcgcggaactcgagtcc gaacgcgacgccgtccgggtcatgggtttcatctga

Rhodococcus sp. JS3073: OYT95_03500 Help Entry OYT95_03500       CDS       T10731                                  Symbol mqo Name (GenBank) malate dehydrogenase (quinone)   KO K00116   malate dehydrogenase (quinone) [EC:1.1.5.4] Organism rhjs  Rhodococcus sp. JS3073 Pathway rhjs00020   Citrate cycle (TCA cycle) rhjs00620   Pyruvate metabolism rhjs01100   Metabolic pathways rhjs01110   Biosynthesis of secondary metabolites rhjs01120   Microbial metabolism in diverse environments rhjs01200   Carbon metabolism Module rhjs_M00009   Citrate cycle (TCA cycle, Krebs cycle) rhjs_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate rhjs_M00982   Methylcitrate cycle Brite KEGG Orthology (KO) [BR:rhjs00001]  09100 Metabolism   09101 Carbohydrate metabolism    00020 Citrate cycle (TCA cycle)     OYT95_03500 (mqo)    00620 Pyruvate metabolism     OYT95_03500 (mqo) Enzymes [BR:rhjs01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.5  With a quinone or similar compound as acceptor     1.1.5.4  malate dehydrogenase (quinone)      OYT95_03500 (mqo) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Mqo DAO FAD_binding_3 Motif Other DBs NCBI-ProteinID:  WAM15732 LinkDB All DBs Position complement(726994..728538) Genome browser AA seq 514 aa AA seqDB search MDKEVDTPVSDQNAVETKTDVVLVGAGIMSATLGAILRQVQPDWSITTFERLDAVAAESS DPWNNAGTGHSALCELNYTPQNADGTVDITKAVNVNEQFQVSRQFWAHGVESGVLTQPKE FINPIPHVSFVHGEANAKYLRARYDALVGHPLFAGMEYIDAPDEFTRRLPLMAKGRDFSD PVALNWTQDGTDVDFGALTKQLLGYVGASGGVVHFGHEVTDLTKQSDGSWVVKVTNRRNG VKKVVRAKFVFVGAGGGALHLLQKSGIEEAKGFGGFPVSGAFLRCTNPELIDQHRAKVYG KAAVGAPPMSVPHLDTRVIGNKPGLLFGPYAGWSPKFLKQGRVTDLPSSVKPNNLLSMLG VGVSELGLVKYLISELAMSEAGRIETLREFVPKALGKDWELITAGQRVQVIRRAKGKGGV LEFGTAVVNAADGSIAGLLGASPGASTAVPAMLDVLQRCFPTQYESWKPKLQEMVPSLGV KLSDDTALFSQVWDWTSKVLQLDTSKVEDASVAV NT seq 1545 nt NT seq  +upstreamnt  +downstreamnt atggacaaggaagtcgatactccagtgtcagatcagaatgcggtagagacgaaaacggat gtagtgctggttggcgcgggcatcatgagcgcgacgctgggagcgatcctgcgtcaggtg cagcccgattggtcgatcaccacattcgagcggctcgacgcagtagccgccgagagcagc gacccgtggaacaacgcgggcaccggccactctgcgctgtgtgagctcaattacaccccg cagaacgccgacggcaccgtggacatcacgaaggccgtcaacgtgaacgagcagttccag gtgtcgcggcagttctgggcgcacggcgtcgagagcggtgtgctgacgcagcccaaggag ttcatcaaccccatcccgcacgtgagcttcgtgcacggcgaggccaacgcgaagtacctc cgggcccgctacgacgccctcgtcggtcaccccctgttcgcgggcatggagtacatcgac gcccccgacgagttcacccgtcgcctgccgttgatggcgaagggccgcgacttcagcgat cccgtcgccctcaactggacccaggacggcaccgacgtcgacttcggcgccctgaccaag cagcttctcggttatgtcggcgcgtccggcggcgtcgtccacttcgggcacgaggtcacc gacctcaccaagcagtccgacggcagctgggtggtcaaggtcaccaaccgacgcaacggt gtgaagaaggtcgtgcgcgccaagttcgtgttcgtcggcgccggtggcggtgcgctgcac ctgctgcagaagtccggcatcgaggaggccaagggcttcggcgggttccccgtcagcggc gcgttcctgcgctgcaccaacccggagctcatcgaccagcaccgcgccaaggtctacggc aaggccgccgtcggcgcgccgcccatgtcggttccgcacctcgatacccgcgtgatcggc aacaagcccggactgctgttcgggccctacgccggctggtcgcccaagttcctcaagcag ggccgcgtcaccgatctgcccagttcggtcaagccgaacaacctgctctcgatgctcggg gtcggggtcagcgaactcggtctcgtcaagtatctgatcagtgagctcgcgatgtccgag gccggccggatcgagaccctccgggagttcgtgccgaaggcgctcggcaaggactgggag ctgatcaccgcgggccagcgcgtgcaggtcatccgtcgagccaagggcaagggtggtgtc ctcgagttcggcaccgccgtcgtcaacgctgccgacggcagcatcgcgggcctgctcggc gcgtcgccgggtgcatcgaccgcggtgcccgccatgctcgacgtgctgcagcgctgcttc ccgacccagtacgagtcgtggaagccgaagctccaggaaatggtgccgtcgctgggcgtg aagctctccgacgacaccgcgctgttctcgcaggtgtgggactggacgtcgaaggtgctc cagctcgacaccagcaaggtggaggacgcgtcggtcgcggtctga

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