Rhizobium sp. Kim5: Kim5_CH02104
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Entry
Kim5_CH02104 CDS
T05501
Symbol
ispDF
Name
(GenBank) bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00900
Terpenoid backbone biosynthesis
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
Module
rhk_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Kim5_CH02104 (ispDF)
Enzymes [BR:
rhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Kim5_CH02104 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Kim5_CH02104 (ispDF)
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Motif
Pfam:
IspD
YgbB
NTP_transf_3
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
ARQ58160
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Position
complement(2093558..2094775)
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AA seq
405 aa
AA seq
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MLQMPSKQLISAGIVIVAAGRGERAGSSKDGPKQYRPIGGTPVIVHTLENFMTWELATEI
VVVIHPDDEALFAKALRHIISATPIQTVHGGPTRQQSVLAGLRYLKDKHVSHVLIHDAVR
PFFDHALLDRIAESLGNGAAAVLPAMPVTDTLKRADGAGTVLTTVSREQLYSAQTPQSFA
FETILDAHEKAAASGRSDFTDDASIAEWLGIPVTIVEGTGDNVKLTVKSDIVMADDKLSA
SLLPDVRTGNGYDVHQLEAGDGVTLCGVFIPHDQKLKGHSDADVALHALTDALLATCGAG
DIGDHFPPSDPQWKGAASRIFIEHAARIVRERGGTIMNADVSLIAEAPKVGPHREAMRAN
LSEYLGIDLERCSVKATTNETIGFVGRREGIAAIATATVVYRGRK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaatgccgtccaagcaactgatatcggccggaattgtcatcgttgccgccggc
cgcggcgagcgggccggatcctccaaggacggccccaagcaatatcgcccgattggcggc
acgccggttatcgttcatacgcttgaaaacttcatgacatgggagctggcgaccgagatc
gtcgtcgtcattcatcccgatgacgaggcgctgtttgccaaggcgctccgccatatcatt
tcggcaacgccgatccaaacggtgcatggcggcccgacccggcagcaatcggtgctggcg
ggccttcgatacctcaaggacaagcatgtcagccatgtgctgattcacgatgcggtgcga
ccctttttcgaccacgcgcttctcgaccgcattgccgaaagccttggcaacggcgcagcg
gcagtgctgccggccatgccggtaaccgatactctgaaacgcgccgacggcgccggcacg
gtgctgacgacggtttcacgcgagcagctttattcggcgcagacgccgcaatccttcgct
ttcgaaaccattctcgacgcgcatgaaaaggcggcggcgagcgggcgcagcgatttcacc
gacgatgcctcgatcgccgaatggctgggcattccggtgacgatcgtcgagggcacggga
gataacgtcaagctgactgttaaaagcgatattgtcatggccgacgacaagctgtcggcg
tcgctgcttcctgatgtgcgcaccggcaacggctacgatgtgcaccagctcgaagcaggc
gacggcgtcacgctctgcggcgtgttcattccgcacgaccagaagctgaaaggccattcg
gatgccgacgtggcgctgcatgcgctgaccgacgcgctgcttgccacctgcggcgccggc
gacatcggcgatcatttcccgccatccgacccgcagtggaagggagcggcttcgcggatc
ttcatcgagcatgccgcgcgaatcgtgcgcgaacgcggcggcacgatcatgaatgccgat
gtctcgctgatcgccgaggcgccgaaggtcggcccgcatcgcgaggccatgcgggcgaac
ctgtcggaatatctcggcatcgatctcgagcgctgctcggtcaaggcgacgaccaacgag
acgatcggcttcgtgggcaggcgcgaaggcatcgcggcgatcgccacggcgaccgtcgtc
tatcgcgggaggaaatga
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