KEGG   Rhizobium sp. Kim5: Kim5_CH03120
Entry
Kim5_CH03120      CDS       T05501                                 
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk00270  Cysteine and methionine metabolism
rhk00450  Selenocompound metabolism
rhk00670  One carbon pool by folate
rhk01100  Metabolic pathways
rhk01110  Biosynthesis of secondary metabolites
rhk01230  Biosynthesis of amino acids
rhk04980  Cobalamin transport and metabolism
rhk04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Kim5_CH03120 (metH)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Kim5_CH03120 (metH)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Kim5_CH03120 (metH)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Kim5_CH03120 (metH)
   04980 Cobalamin transport and metabolism
    Kim5_CH03120 (metH)
Enzymes [BR:rhk01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Kim5_CH03120 (metH)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: ARQ59153
LinkDB
Position
complement(3136654..3140427)
AA seq 1257 aa
MFDNLFGPETGKRDGNEVFAALRKAASERILVLDGAMGTQIQGLGYDEDQFRGTRFIGCA
CHQKGNNDLLILTQPDAIEEIHYLYAKAGADILETNTFSSTRIAQADYAMENAVYDLNRE
GAEIVRRAALRAEREDGRRRFVAGAIGPTNRTASISPDVNNPGFRAVTFDDLREAYGEQI
DGLIDGGADIILIETIFDTLNAKAAIFACEERFEARGVRLPVMISGTITDLSGRTLSGQT
PSAFWNSVRHANPFTIGLNCALGANAMRPHLQELSGVADTFVCAYPNAGLPNEFGQYDET
PELMAAQIDSFAREGLVNIVGGCCGSTPEHIRAIAETVAKYKPRPIPAHRPFMSLSGLEP
FELTKDIPFVNVGERTNVTGSAKFRKLITNADYTAALDVARDQVENGAQVIDINMDEGLI
DSEKAMVEFLNLIAAEPDIARVPVMIDSSKFSIIEAGLKRVQGKAIVNSISLKEGEENFL
AQARLLHNYGAAVVVMAFDETGQADNYERKVEICTRAYKLLTEKIGFPPEDIIFDPNIFA
VATGIEEHNNYGVDFIEATRTIRERMPLVHISGGVSNLSFSFRGNEPVREAMHAVFLYHA
IQAGMDMGIVNAGQLAVYDNIDPELREACEDVVLNRRPDGTERLLEVAERFRGAGAREGR
VQDLSWREWSVEKRLEHALVNGITEYIEADTEEARQQAARPLHVIEGPLMAGMNVVGDLF
GSGKMFLPQVVKSARVMKQAVAVLLPYMEEEKRLNGGDDRKSAGKILMATVKGDVHDIGK
NIVGVVLACNNYEIVDLGVMVPATKILETAIAEKVDVIGLSGLITPSLDEMVHVAAEMER
QGFEIPLLIGGATTSRVHTAVKIHPGYNKGQAIYVTDASRAVGVVSALLSPETRQGYVDD
TRAEYAKVAAAHARSEAEKVRLPLPRARENAHMIDWPAYQPTKPQFFGTRVFEDYDLADL
ARYIDWTPFFQTWELRGRFPAILEDEKQGEAARALWADAQAMLKKIIDEKWFRPRAVIGF
WPAGAVGDDIRLFTDESRSKELATFYTLRQQLSKRDGRANVALSDFVAPVTSGVEDYVGG
FVVTAGIEEIAIAERFERANDDYSSILVKALADRFAEAFAERMHEQVRREYWGYARDEHL
SNEDLIGEAYAGIRPAPGYPAQPDHTEKKTLFKLLDAEHTAGVKLTESYAMWPGSSVSGL
YIGHPDSYYFGVAKVERDQVEDYAKRKGMEVSEVERWLGPVLNYVPRKADEDIEDAA
NT seq 3774 nt   +upstreamnt  +downstreamnt
gtgtttgacaacctctttggtccggaaacgggcaagcgtgacggcaatgaagttttcgca
gcgctgcgcaaagccgccagcgaacgcatcctcgtcctcgacggcgccatgggcacgcag
atccaggggctcggctatgacgaagaccagttccgcggcacccgcttcattggctgcgcc
tgccatcagaaaggcaataacgaccttctgatcctgacccagccggatgcgatcgaagag
atccattacctttacgccaaggccggcgccgatattctcgagaccaacaccttctcctcg
acccgcatcgcccaggcagattacgcgatggaaaatgcggtctacgacctcaacagggag
ggcgccgagatcgtccgccgcgcggctctgcgcgccgagcgtgaggacggccgccgccgt
ttcgtcgccggcgccatcggtccaaccaaccgcaccgcctcgatctcgcccgatgtcaac
aatcccggtttccgggccgtcaccttcgacgatctcagggaagcttatggcgagcagatc
gacggtctgatcgacggcggcgccgacattatcctcatcgagacgatcttcgatacgctg
aacgccaaggcggcgatctttgcctgcgaggagcgcttcgaagccaggggcgtgcgcctg
ccggtgatgatctccggcacgatcaccgacctttccggccgcacgctctccggccagacg
ccgtcggccttctggaactcggtgcgccacgccaatcccttcacgatcgggctcaactgc
gcactcggcgccaatgcgatgcgcccgcatctgcaggagctttcgggtgtcgccgacacc
ttcgtctgcgcctatccgaacgccggcctgccgaacgaattcggccaatatgacgagacg
ccggagctgatggcggcgcagatcgacagcttcgcccgcgaaggcctggtcaatatcgtc
ggcggctgctgcggctcgacgccggaacatatccgggcgatcgccgagaccgttgccaag
tacaagccgcggccgattccggcgcaccgccccttcatgtcgctgtccggtctcgagccc
ttcgagctcaccaaggacatccctttcgtgaacgtcggcgagcgcaccaacgtcaccggt
tcggcgaagttccgcaagctgatcaccaatgccgattacacggcagcgctcgatgtcgcc
cgcgaccaggtcgagaacggcgcccaggtgatcgacatcaacatggacgagggcctgatc
gattccgaaaaggcgatggtcgagttcttgaacctgatcgccgccgagcccgacatcgcc
cgcgtgcccgtgatgatcgacagctcgaaattctcgatcatcgaagccggcctgaagcgc
gtccagggcaaggcgatcgtcaactcgatctcgctgaaggaaggcgaggagaatttcctc
gcccaggcgcggctgctgcacaattacggcgccgccgtcgttgtcatggccttcgatgag
acggggcaggcggacaattacgagcgcaaggtcgagatctgcacgcgcgcctacaagctg
ctgaccgaaaagatcggcttcccgcccgaggatatcatcttcgacccgaacatcttcgcg
gtggcgaccggcatcgaagagcacaataattacggcgtcgatttcatcgaggcgacgcgg
acgatccgcgagcgcatgccgctcgtgcatatttccggcggcgtctccaatctgtccttc
tcgttccgcggcaatgagccggtgcgcgaggcgatgcacgccgtgttcctctaccacgcc
atccaggcgggcatggacatgggcatcgtcaatgccggccagcttgccgtctacgacaat
atcgatccggaactgcgcgaggcctgcgaggacgtggtgctgaaccgccggcccgacggc
accgagcggctgctcgaagtggccgagcgcttccgtggcgctggtgcaagggaaggccgg
gtgcaggatctctcctggcgcgaatggagtgtcgagaagcgcctcgaacacgcgctagtc
aatggcatcaccgaatatatcgaagccgataccgaggaggcccgccagcaggcggcgcgg
ccgctgcacgtcatcgaagggccgctgatggccggcatgaatgtcgtcggcgacctcttc
ggctcgggtaagatgttcctgccgcaggtggtcaagtcggcgcgcgtgatgaaacaggct
gtcgccgtgctgcttccttacatggaagaggaaaagcgcctcaatggtggtgacgaccgg
aaatcggcgggcaagatcctgatggcgacggtcaagggcgacgtgcacgatatcggcaag
aatatcgtcggcgtcgtgctcgcctgcaacaattacgaaatcgtcgacctcggtgtcatg
gtgccggcgacgaagatcctcgaaacggcgatcgccgaaaaggtcgatgtcatcggcctt
tccggcctgatcacgccgtcgctcgacgagatggtgcatgtcgcggccgagatggagcga
cagggtttcgagatcccgctgctgatcggcggcgcgaccaccagccgcgtgcatacggcg
gtgaagatccaccccggctacaacaaaggccaggcgatctacgtcaccgacgcgagccgc
gccgtcggtgtcgtctcggcgctgctgtcgccggagacgcgccagggctatgtcgacgat
acaagagccgaatatgccaaggtggcggccgcgcatgcgcgcagcgaagccgagaaggtg
cggctgccattgccgcgggcgcgtgagaatgcccatatgatcgactggccggcctaccag
ccgacgaaaccgcaattcttcggcacgcgggtgttcgaggattacgatctggccgacctt
gcgcgatatatcgactggacaccgttcttccagacctgggagttgcgcggccgtttccct
gccattctcgaagacgagaagcagggcgaggcagcgcgggcgctttgggccgatgcgcag
gcgatgctgaagaagatcatcgacgagaaatggttccggccgcgcgccgtcatcggcttc
tggccggccggcgccgtcggcgacgacattcgcctgttcaccgatgaaagccgcagcaag
gaacttgcgactttctacaccttgcgccagcagctttcgaagcgggacggacgggcgaac
gtggcgctctccgattttgtcgcgcctgtcacaagcggcgtcgaggactatgtcggcggc
ttcgtggtgacggcgggcatcgaggagatcgccatcgccgaacgcttcgaacgtgcgaac
gacgactattcctcgatcctggtcaaggcgctggccgaccgctttgccgaagccttcgcc
gagcgcatgcacgagcaggtgcggcgcgaatattggggctatgccagggatgagcacctc
agcaacgaggatctcatcggcgaggcctatgccggcatccgtccggcgccaggctatccc
gctcagcccgaccacaccgagaagaagacgctcttcaagctgctcgatgcggaacatacc
gcaggcgtgaagctgacggaaagctatgcgatgtggccgggctcctccgtctccggtctc
tatatcggccaccccgactcctattatttcggcgtcgccaaggtggagcgcgatcaggtg
gaagactatgccaagcgcaagggtatggaagtttccgaagtcgagcgctggctcggaccg
gtgctgaactacgtgccgcgcaaggcggacgaggacatcgaggacgcggcctga

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