Rhizobium favelukesii: LPU83_3706
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Entry
LPU83_3706 CDS
T03046
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPU83_3706 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_3706 (nth)
Enzymes [BR:
rhl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LPU83_3706 (nth)
DNA repair and recombination proteins [BR:
rhl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPU83_3706 (nth)
Prokaryotic type
LPU83_3706 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CDM59349
UniProt:
W6RER6
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All DBs
Position
3666511..3667293
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AA seq
260 aa
AA seq
DB search
MPTPKLKSAATSPQTSKVILHRKKPATIRSAYSEAEREEIFRRFSVQRPEPSGELEHTNP
FTLVVAVALSAQATDAGVNKATRALFKIADTPEKMLALGEERVRDYIKTIGLYRNKAKNV
IALSQILVEKFGGVVPQTRDELVTLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRIR
LAPGKTPDEVEERLMKVVPKRYLYHAHHWLILHGRYTCKARKPECERCVIADICKSPEKT
CDVPAPLVELPRQVIGEAVE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccaactccgaaactcaaatccgccgccacatcgccgcagacctcaaaagtgatcctt
caccgcaagaagccggcaacgatccgttccgcctattccgaagccgagcgcgaggagata
ttccgccgcttctccgtccagcgcccggagcccagtggcgaacttgagcatacaaacccg
ttcacacttgtcgtcgccgtggccctgtccgcccaggcgacggatgccggcgtcaacaag
gcgacgcgcgcgctcttcaagatcgccgacacgcccgaaaagatgctggcgctcggtgag
gaacgggtgcgggattacatcaagacgatcggcctttatcgcaacaaggcgaagaacgtc
atcgctctctcgcagatcctggtcgagaaattcggcggcgtcgtgccgcaaacgcgcgac
gagctggtgacgcttcccggtgttggccgcaaaaccgccaacgtcgtgctctccatggcc
ttcggtcaggcgacaatggcggtggatacccacattttccgcatcgccaaccgcatcagg
ctggcgccgggtaagacgccggatgaggtcgaggaacggctgatgaaggtcgtcccgaag
cgctacctctatcacgcgcaccactggctcatcctgcatggccgctacacctgcaaggcc
cgcaagccggaatgtgagcgttgcgtcatcgccgacatctgcaaatcgcccgagaagacc
tgcgacgtgccggcgccgctggtcgagctaccgcgccaagtgattggagaggccgtcgag
taa
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