Rhodococcus sp. M8: ISO16_20495
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Entry
ISO16_20495 CDS
T11421
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ISO16_20495 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_20495 (nth)
Enzymes [BR:
rhmm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ISO16_20495 (nth)
DNA repair and recombination proteins [BR:
rhmm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ISO16_20495 (nth)
Prokaryotic type
ISO16_20495 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QPG44256
LinkDB
All DBs
Position
4521947..4522741
Genome browser
AA seq
264 aa
AA seq
DB search
MEQVHATPSESPDVRRRRVSGGERKPESRLALVRRARRMNRRLAEAFPHVYCELDFTTPL
ELAVATILSAQCTDVRVNQVTPALFARYPDARAYAEADRAELEEYIRPTGFYRNKANSLI
GLGQALLERFDGEVPRRLEDLVTLPGFGRKTANVVLGNAFDIPGITVDTHFQRLVHRWKW
TEETDPVKIEHAVGALVDRKEWTLLSHRVIFHGRRVCHARKPACGICVLAKDCPSYGIGP
TDPVTAAALVKGPETEHLLELAGR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtggagcaggtgcatgcgaccccgtccgagagtcccgacgtgcgccgacgacgcgtgtcc
ggaggcgagcggaaacccgagagcaggctcgccctggtgcggcgggcccgccgcatgaac
cggcggctcgccgaggcgttcccccacgtgtactgcgaactcgacttcaccacgccgctc
gagctggcggtcgccacgatcctgtccgcgcagtgcaccgacgtgcgggtcaaccaggtc
accccggccctgttcgcccgctacccggacgcccgcgcctacgcggaggccgaccgggcc
gagctcgaggagtacatccggcccaccggtttctaccgcaacaaggccaactccctgatc
ggcctcggacaggccctgctcgagcggttcgacggcgaggtaccgcgccgcctcgaggat
ctcgtcacacttcccggattcggccgcaagaccgccaacgtggtcctcggcaacgcgttc
gacatccccggcatcaccgtcgacacccacttccagcgtctcgtgcaccgctggaagtgg
accgaggaaaccgaccccgtcaagatcgaacacgccgtcggcgcgctcgtcgaccgcaag
gaatggaccctgctctcgcaccgggtgatcttccacggccggcgcgtctgccacgcccgc
aaacccgcctgcggcatctgcgtgctggccaaggactgcccgtcctacggcatcggaccc
accgaccccgtgaccgccgccgcgctggtgaagggaccggagaccgagcacctgctcgaa
ctggccggacggtga
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