Rhizobium sp. N1341: AMJ98_CH03072
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Entry
AMJ98_CH03072 CDS
T04420
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00270
Cysteine and methionine metabolism
rhn00450
Selenocompound metabolism
rhn00670
One carbon pool by folate
rhn01100
Metabolic pathways
rhn01110
Biosynthesis of secondary metabolites
rhn01230
Biosynthesis of amino acids
rhn04980
Cobalamin transport and metabolism
rhn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AMJ98_CH03072 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AMJ98_CH03072 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AMJ98_CH03072 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AMJ98_CH03072 (metH)
04980 Cobalamin transport and metabolism
AMJ98_CH03072 (metH)
Enzymes [BR:
rhn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
AMJ98_CH03072 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ANL10707
LinkDB
All DBs
Position
complement(3103550..3107323)
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AA seq
1257 aa
AA seq
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MFDTLFGPETGKRDGSEVFAALKKAASERILVLDGAMGTQIQGLGYDEDQFRGTRFIGCA
CHQKGNNDLLILTQPDAIEEIHYKYAKAGADILETNTFSSTRIAQADYQMEGAVYDLNKE
GAEIVRRAALRAEREDGRRRFVAGAIGPTNRTASISPDVNNPGFRAVTFDDLREAYGEQI
DGLIDGGADIILIETIFDTLNAKAAIFACEERFEAKGVRLPVMISGTITDLSGRTLSGQT
PSAFWNSVRHANPFTIGLNCALGANAMRPHLQELSGVADTFICAYPNAGLPNEFGQYDET
PELMAAQIDSFAREGLVNIVGGCCGSTPEHIRAIAETVAKYKPRPIPEHRPFMSLSGLEP
FELTKDIPFVNVGERTNVTGSAKFRKLITNADYTAALDVARDQVENGAQVIDINMDEGLI
DSEKAMVEFLNLIAAEPDIARVPVMIDSSKFSIIESGLKRVQGKPIVNSISLKEGEENFL
AQARLLRNYGAAVVVMAFDETGQADSYERKVEICERAYTLLTEKIGFPPEDIIFDPNIFA
VATGIEEHNNYGVDFIEATRTIRERMPLVHISGGVSNLSFSFRGNEPVREAMHAVFLYHA
IQAGMDMGIVNAGQLAVYDNIDSELREACEDVVLNRRPDSTERLLEVAERFRGAGAKEGR
VQDLSWREWSVEKRLEHALVNGITEYIEADTEEARRQAARPLHVIEGPLMAGMNVVGDLF
GSGKMFLPQVVKSARVMKQAVAVLLPYMEEEKRLNGGDDRQSAGKILMATVKGDVHDIGK
NIVGVVLACNNYEIVDLGVMVPATKILETAIAEKVDVIGLSGLITPSLDEMVHVASEMER
QGFEIPLLIGGATTSRVHTAVKIHPGYNKGQAVYVTDASRAVGVVSALLSPETRQGYVDD
IRAEYAKVAAAHARSEAEKVRLPLSRARENAHKIDWSAYKPTKPEFFGTRVFEDYDLAEL
ARYIDWTPFFQTWELRGRFPAILEDEKQGEAARALWADAQAMLKKIIDEKWFRPRAVIGF
WPAGAVGDDIRLFTDESRGQELATFYTLRQQLSKRDGRANVALSDFVAPVTSGVQDYVGG
FVVTAGIEEIAIAERFERSNDDYSSILVKALADRFAEAFAERMHEQVRREYWGYARDEHL
SNEDLIGEAYAGIRPAPGYPAQPDHTEKATLFKLLDAEKAAGVKLTESYAMWPGSSVSGI
YIGHPDSYYFGVAKVERDQVEDYAKRKGMEVSEVERWLGPVLNYVPRKADEEIEDAA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgatactctctttggtccggaaacgggcaagcgtgacggcagtgaagttttcgcc
gctttgaagaaagccgccagcgagcgcatccttgttctcgacggcgccatgggcacgcag
atccagggcctcggctatgacgaagaccagtttcgcggcacccgcttcatcggctgcgcc
tgccaccagaaaggcaataacgaccttctgatcctgacccagccggatgcgatcgaagag
atccattataaatacgccaaggccggcgccgatatcctcgagaccaacaccttctcctcg
acccgcatcgcccaggccgattatcagatggaaggcgccgtctacgacctcaacaaggaa
ggtgccgaaatcgtccgccgcgcggctctgcgcgccgagcgcgaggacggccgccgccgt
ttcgtcgccggcgccatcggcccgaccaaccgcaccgcctcgatctcgcccgacgtcaac
aatcccggcttccgcgccgtcaccttcgacgatctcagggaagcctatggcgagcagatc
gacgggctgatcgacggcggtgccgacatcatcctcatcgagacgatcttcgacacgctg
aacgccaaggcggcgattttcgcctgcgaggagcgtttcgaggccaagggcgtgcgcctg
ccggtgatgatctccggcacgattaccgacctttccggccgtacgctctccggccagacg
ccgtcggccttctggaattcggtgcgccacgccaatcccttcacgatcggcctcaactgc
gcgctcggggcgaacgcgatgcgcccgcatctgcaggaactgtcgggcgtcgccgacacc
ttcatctgcgcctatccgaatgccggcctgccgaacgaattcggccagtatgacgaaacg
ccggagctgatggcggcccagatcgacagttttgcccgtgaaggtctggtcaacatcgtc
ggcggctgctgcggctcgacgcccgaacatatcagggcgatcgccgagaccgtcgccaag
tacaagccgcggccgatcccggaacatcgccccttcatgtcgttgtctggcctcgaacct
ttcgagttgaccaaggacattcccttcgtcaatgtcggcgagcgcaccaacgtcaccggc
tcggcgaagttccgcaagctgatcaccaatgccgactacacggcagcgctcgatgtcgcg
cgcgaccaggtcgagaacggcgcgcaggtgatcgacatcaacatggacgagggcctgatc
gattccgagaaggcgatggtcgagttcctcaacctgatcgccgccgagcccgacatcgcc
cgcgtgcctgtgatgatcgactcctcgaaattctcgatcatcgaatccggcctgaagcgg
gtgcagggcaagccgatcgtcaactcgatctcgctgaaggaaggcgaggagaatttcctg
gcccaggcgcggctcctgcgcaattacggtgcggccgtcgtcgtcatggccttcgacgaa
acgggacaggccgacagctatgagcgcaaggtggaaatctgcgagcgtgcctacacgctg
ctgaccgaaaagatcgggttcccgcccgaggatattatcttcgaccccaatattttcgcg
gtcgcgaccggcatcgaagaacacaataattacggtgtcgacttcatcgaggcgacgcgg
acgatccgtgagcgcatgccgctcgtgcatatctccggcggcgtctccaacctgtccttc
tcgttccgcggcaacgagccggtgcgcgaggcgatgcacgcggtgttcctctaccacgcc
atccaggcgggtatggacatgggcatcgtcaatgccggccagctggccgtctacgacaac
atcgattccgagctgcgcgaagcctgcgaggacgtggtgctgaaccgccgtcccgacagc
accgaacggctgctcgaagtggccgaacgtttccgtggcgccggggcaaaggagggtcgt
gtccaggacctctcctggcgcgagtggagcgtcgagaagcgtctcgagcacgcgctggtc
aacggcatcaccgaatatatcgaggccgatacggaagaggcgcgccggcaggccgcccgg
ccgttgcacgtcatcgaagggccgctgatggccggcatgaacgtcgtcggtgatctcttc
ggctcgggcaagatgttcctgccgcaggtcgttaaatccgcccgcgtcatgaagcaggcc
gttgccgtccttctcccctatatggaggaggagaagcgcctcaatggcggcgacgatcgg
cagtcggcgggcaagatcctgatggcgacggtcaagggcgacgtgcacgatatcggcaag
aacatcgtcggcgtcgtgctggcctgcaacaattacgagatcgtcgacctcggcgtcatg
gtgcccgcgacgaagatccttgaaacggcgatcgccgaaaaggtcgacgtcataggtctt
tccggtctgatcacgccgtcgctcgacgagatggtgcatgttgcgtccgagatggaacgg
cagggcttcgagattccgctgctgatcggcggcgccacgaccagccgcgtacatacggct
gtgaagatccatcccggctacaacaagggccaggcggtctacgtcaccgatgcgagccgc
gccgtcggcgtcgtctcggcgctgctctcgccggagacgcggcagggctatgtcgacgat
ataagagccgaatacgccaaggtggcggccgcgcatgcccgcagtgaagcggagaaggtg
cgtttgccactgtcgcgggctcgcgagaacgcgcataagatcgactggtcggcctacaag
ccgaccaagcctgagttcttcggcactcgggtgttcgaggattacgatctggccgaactc
gcgagatacatcgactggacgccgttcttccagacctgggaattgcgcggtcgtttcccc
gccattctcgaagacgagaagcagggcgaggcggcgcgtgcgctctgggccgatgcgcag
gccatgctgaagaagatcatcgatgagaagtggttccgcccgcgcgccgtcatcggcttc
tggccggcaggcgccgtcggcgacgacatccgcctgttcaccgacgaaagccgcggccag
gagcttgccaccttctacacgcttcgccagcagctttcgaagcgggacgggcgggcgaat
gtggcgctttcggacttcgtcgcgccagtcacaagcggcgtgcaggactatgtcggcggc
ttcgtggtaacggccggtatcgaggaaatcgccatcgccgaacgcttcgagcggtcgaac
gacgactattcctcgatcctcgtcaaggcgctggccgaccgctttgcggaagccttcgct
gagcgcatgcatgagcaggtgcggcgcgaatattggggttatgcaagggatgagcacctc
agcaacgaggatctcatcggtgaagcctatgccggcatccgtccggcgcctggttatccc
gcccagcccgaccacacggaaaaggcaacgctcttcaagctgctcgatgcagaaaaagcc
gccggcgtgaagctgacggagagctatgcgatgtggcccggctcatctgtatccggcatc
tatatcggccatcccgattcctattatttcggcgtcgccaaggtggagcgggaccaggtg
gaggactatgccaagcgcaagggcatggaggtttccgaggtcgaacgctggctcgggccg
gtgctgaactacgtgccgcgcaaggcggacgaggagattgaggacgcggcatag
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