Rhodoferax sp. AJA081-3: HZ993_04190
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Entry
HZ993_04190 CDS
T08330
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HZ993_04190 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoa03400
]
HZ993_04190 (nth)
Enzymes [BR:
rhoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HZ993_04190 (nth)
DNA repair and recombination proteins [BR:
rhoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HZ993_04190 (nth)
Prokaryotic type
HZ993_04190 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QTN29052
UniProt:
A0A975I0R6
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All DBs
Position
898588..899232
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AA seq
214 aa
AA seq
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MKPAQIEAFFATLKAANPMPVTELEYTSVFELLTAVLLSAQATDVGVNKATRRLFPVANT
PQAILDLGLEGLESYIKTIGLYHSKSKHLLQTCRMLVDLHGGKVPGTREELQALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVGNRTGLAPGKTPEQVEQQLLKRIPAPYMVDAHHWLI
LHGRYVCQARKPLCWQCGVFAQCGFGDKTPAPAN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgcccaaatcgaagccttcttcgccacactgaaagccgccaaccccatgccg
gtaaccgagctcgaatacaccagtgtgttcgagctgctcaccgctgtgttgttgagcgcg
caggctaccgatgtgggggtcaacaaggcgacgcgcaggctgtttcccgtggccaataca
ccgcaggcgattctggatctgggtctggagggactggagtcgtatatcaagaccattggc
ctgtaccacagcaaatccaaacacctgctgcaaacctgccgcatgctggtggacctgcac
ggcggcaaggtgcccggcacccgagaggagctgcaggccctgcccggcgtaggccgcaag
acggcgaacgtggtgctgaacgtggcctttggtgaacccaccatggctgtggacacgcac
attttccgcgtaggcaatcggacggggctggccccgggcaaaacgccggagcaggtggag
cagcaattgctcaaacgcattcccgcgccttacatggtcgatgcccaccactggctgata
ctgcatggccgttatgtgtgccaggcccgcaaacccctgtgctggcaatgcggtgttttt
gcccaatgcggctttggcgataagacgcctgcaccagcgaactga
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