Rhodoferax sp. AJA081-3: HZ993_22480
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Entry
HZ993_22480 CDS
T08330
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa01501
beta-Lactam resistance
rhoa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HZ993_22480
01503 Cationic antimicrobial peptide (CAMP) resistance
HZ993_22480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoa02000
]
HZ993_22480
01504 Antimicrobial resistance genes [BR:
rhoa01504
]
HZ993_22480
Transporters [BR:
rhoa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HZ993_22480
Antimicrobial resistance genes [BR:
rhoa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HZ993_22480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QTN27982
LinkDB
All DBs
Position
4803247..4806354
Genome browser
AA seq
1035 aa
AA seq
DB search
MWITKTSINQPVFATMVMLALMVLGVISYSRLGVEQMPDIQVPGIWMQVRYPGASPEQVE
ADLVKPLEEAVNTVNGVRNIFSNSLEGRAEIWTEFALSTDMTKAVQDMRDKVAQIRPMFP
RDAKDPLIVRGQFDNAEPTATFGVLSNTRSMRELSTFADQQIVKRLQGVSGVGQVTMGGA
VQRQVSISLKPQQMLAYQIGVDEIVTAVRQINQDMPAGSLRATEQEQLVRVEGKLKSVDA
FRHIIVARRNGTAVTLDQLATIKDGERELQSIGRINGQPALTLSVFKTQDANLVVVGDDV
AKAVENLRKQLPPDVEIRPISENASYVKKSLASVKSTIVEGGLLTILIVFLFLHSWRSTI
ITGITLPISVVSTFIAMYAFGFTINAVTLMALSLCIGLLIDDAIVVRENIVRHVGMGKDH
VTAARDGTQEIGLAVLATTLAICAVFIPVAFMTGIIGKIFFQFGITVTVAVLVSLFVSFT
LDPMLSSVWKDPVESRFSWAPWLGRLMERVEHRVDWLHVVYGRLLERTLVRRKTTLAVAA
AIFAASLGLVPLVGGEFMPKTDQGVFALKIKTPVGTSLLYTDNKVRQVEQAIKEFPEIEL
VSTTVGNNNRNEAELLIKLVDKRTTVRRSQKEVETAVRERLKSIPGIEPSLGFDKPIWIN
LIGPASAELPKLLDDVMGQIRAVPGIVDLEHSLQAANPAVIIKVNQAAASDLGLSLERVG
SALRPFVNGDQVSNWLAPDGQNYEVNVQLPPSGRQKLSDLGDLYISTSRVDANGTPIMVP
LRQVVEFIPSTSPQVIKRQNLERRVGIYANVEGRPTGDAAKEVKKVVQAINLPQGYRFDI
KGEAEQNDEAGAAAMVAMVLAVIFIYFILASQFASFLQPIAIMASLPFTLVGVMAALILT
GSTLNLFSIIGFIMLMGLVVKNAILLVDFANQSQREGLNQHDAVLRAGQVRLRPIIMTTL
AMIFGMLPMAIGWGEGSEAQAPMGRAVIGGLITSTLLTLVVVPVLYTYLDNLPRWFKRRF
GAQKTGVEPAAAPLA
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcaccaaaaccagtatcaaccagcccgtcttcgccaccatggtcatgctggcc
ctgatggtgctgggcgttatctcctacagccgcctgggcgtggagcagatgcccgacatc
caggtgcccggcatctggatgcaggtgcgttaccccggcgcatcgcccgaacaggtagag
gccgacctggtcaagccgctggaagaggcggtcaacaccgtgaacggcgtgcgcaatatc
ttcagcaactcgctggaaggccgcgccgaaatctggaccgaattcgcgctgtccaccgac
atgaccaaggccgtgcaggacatgcgcgacaaggtggcgcagattcgacccatgtttccg
cgggatgccaaagacccgctgatcgtgcgtggccagtttgacaatgccgagcccacggcc
acctttggcgtgttgtccaatacgcgcagcatgcgcgagttgtccacctttgccgaccag
caaattgtcaagcgcttgcagggtgtgtctggtgtgggccaggtgacgatgggcggcgcg
gtgcagcgccaggtgtccatctcgctcaagccccagcagatgctggcctaccagattggt
gtggacgaaattgttactgccgtccgccagatcaaccaggacatgccggccggttcgctg
cgtgccaccgagcaggagcagctggtgcgggtagagggcaagctcaagagtgtggacgcc
tttcgccacatcatcgtggcgcggcgcaacggcacagcggtcacgctggaccagctggcc
accatcaaggacggtgaacgagagctgcagtccattggccgcatcaacggccagcccgcg
ctgaccctgagcgtgttcaaaacgcaggatgcgaatctggtggtggtgggtgacgacgtg
gccaaggcggtggagaacctgcgcaagcagctgccgcccgatgtggagatacgccccatc
tccgagaacgcaagttacgtcaagaagtcactggctagcgtcaaaagcaccattgtggaa
ggcggcctgctgaccatcctgatcgtgtttttgttcctgcactcgtggcgcagcaccatc
atcaccggcatcacactgccgatctcggtggtgtccacctttatcgccatgtatgccttt
ggcttcaccatcaacgcggtgacgctgatggccttgtcgctgtgtatcggcctgctgatt
gacgacgcgattgtggtgcgcgaaaacatcgtgcgccacgtgggcatgggcaaggaccat
gtgactgcggcccgcgacggtacccaagagattggcctggccgtgctggctaccacgctg
gccatctgcgcggtgtttatccccgtggccttcatgaccggcatcatcggcaagatcttt
tttcagtttggcattaccgtcaccgtggcggtgctggtgtcgctgtttgtcagcttcacg
ctggacccgatgctgtcatcggtgtggaaagacccggtggagtcgcgcttcagctgggca
ccctggttgggccgtttgatggagcgggtggagcaccgggtggattggctacacgtcgtc
tacgggcgcctgctggagcgcacgctggtgcgccgcaagaccacgctggccgtggcggcc
gccatttttgcggccagcctgggactggtgccgctggtgggtggtgaattcatgcccaag
accgaccagggtgtgttcgcccttaagatcaagacgccggtgggcaccagcctgctctat
accgacaacaaggtgcgccaggtggagcaggccatcaaggagttccctgagatcgagctg
gtcagcaccacggtgggtaacaacaaccgcaacgaggccgagttgctgatcaagctggta
gacaaacgcactaccgtgcggcgcagccagaaagaggtagagaccgcggtacgggagcgt
ctgaaaagcattcccggcatagaaccttcgctgggctttgacaagcccatctggatcaac
ctgatcggccctgcctctgcggagctgcccaagctgctggacgatgtcatgggccagata
cgtgcggtgccgggcattgtggacctggagcacagcctgcaggccgccaaccctgcggtc
atcatcaaggtcaaccaggcggcggccagtgacctgggtctgtcgctggagcgtgtgggc
agtgcgctgcgcccctttgtcaatggcgaccaggtcagcaactggctggcgcccgatggc
cagaactacgaggtgaatgtgcaactgcccccatcgggccggcaaaagctttcagatctg
ggcgacttgtacatctccaccagccgggtggatgccaacggcacacccatcatggtgccg
ctgcgccaggtggtggaattcatcccatcaaccagcccgcaggtcatcaaacgccagaac
ctggagcgccgcgtgggcatctacgcgaatgtggaaggtcgccccacaggcgacgcggct
aaggaggtgaagaaggtggtgcaggccatcaacctgccccaaggctaccggtttgacatc
aagggcgaggccgagcagaacgacgaggccggcgccgccgccatggtggccatggtgctg
gcggtgatcttcatctacttcatcctggcgtcacaatttgccagcttcttgcagcccatc
gccatcatggcctcgctgccgttcacactggtgggtgtgatggcggcgttgatattgacg
ggctccacgttgaacctgttctccatcatcggcttcatcatgctgatgggcctggtggtg
aagaacgcgattttgcttgtggactttgccaaccagtcgcagcgtgagggcctcaaccag
catgacgccgtgttgcgtgccggccaggtgcggctgcggcccatcatcatgaccacgctg
gccatgatttttggcatgttgcccatggccattggctggggggagggcagtgaggctcag
gcgccaatgggccgcgcggtcattggcgggctgatcaccagcaccctgctgacgctggtc
gtggtgccggtgttgtatacctacctggacaacctgccacgctggttcaaacgccggttt
ggggcgcaaaaaacgggcgtggagcctgcggcagcgcccctggcatag
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